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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045477 through 18771 annotations produced 1 hits



Gustatory receptor 64c (Gr64c):

Annotation Number : CG32256
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045477
Gbrowse : chr3L:4030431-4031925 (+) // 100.0 //
Probeset : 1629590_at
Accessions : protein= NP_523913;, nucleotide= NM_079189;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045477.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 ± 00 of 4 0.80None
Head11 ± 24 of 4 5.10Up
Eye2 ± 00 of 4 0.88None
Thoracicoabdominal ganglion3 ± 00 of 4 1.30None
Salivary gland5 ± 10 of 4 2.52None
Crop4 ± 11 of 4 1.70None
Midgut2 ± 00 of 4 0.90None
Tubule3 ± 00 of 4 1.40None
Hindgut5 ± 11 of 4 2.20None
Heart4 ± 10 of 4 1.99None
Fat body6 ± 40 of 4 2.79None
Ovary1 ± 00 of 4 0.50None
Testis3 ± 01 of 4 1.70None
Male accessory glands4 ± 10 of 4 1.90None
Virgin spermatheca1 ± 10 of 4 0.84None
Mated spermatheca1 ± 00 of 4 0.66None
Adult carcass8 ± 20 of 4 3.70None
Larval CNS2 ± 11 of 4 0.89None
Larval Salivary gland1 ± 00 of 4 0.55None
Larval midgut1 ± 00 of 4 0.64None
Larval tubule2 ± 10 of 4 1.10None
Larval hindgut2 ± 00 of 4 0.96None
Larval fat body7 ± 11 of 4 3.30Up
Larval trachea2 ± 20 of 4 1.12None
Larval carcass1 ± 10 of 4 0.83None
S2 cells (growing)3 ± 00 of 4 1.57None
Whole fly2 ± 10 of 4

Looking for FBgn0045477. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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