FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0045485 through 18771 annotations produced 1 hits

Gustatory receptor 36c (Gr36c):

Annotation Number : CG31748
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045485
Gbrowse : chr2L:17180337-17181632 (+) // 100.0 //
Probeset : 1627125_at
Accessions : protein= NP_724040;, nucleotide= NM_165207;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045485.
VDRC has 2 RNAi stocks for FBgn0045485 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	3 ± 1	0 of 4	0.90	None
Head	5 ± 1	0 of 4	1.30	None
Eye	0 ± 0	0 of 4	0.17	Down
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.50	None
Salivary gland	10 ± 3	0 of 4	2.38	None
Crop	3 ± 1	1 of 4	0.90	None
Midgut	2 ± 0	0 of 4	0.70	None
Tubule	2 ± 0	0 of 4	0.50	Down
Hindgut	6 ± 1	0 of 4	1.60	None
Heart	1 ± 0	0 of 4	0.25	Down
Fat body	5 ± 2	0 of 4	1.33	None
Ovary	3 ± 0	0 of 4	0.70	None
Testis	2 ± 1	0 of 4	0.50	None
Male accessory glands	6 ± 1	0 of 4	1.40	None
Virgin spermatheca	4 ± 2	1 of 4	1.02	None
Mated spermatheca	1 ± 0	0 of 4	0.40	Down
Adult carcass	13 ± 3	2 of 4	3.00	None
Larval CNS	3 ± 1	0 of 4	0.83	None
Larval Salivary gland	2 ± 1	0 of 4	0.55	None
Larval midgut	2 ± 0	0 of 4	0.65	None
Larval tubule	7 ± 1	0 of 4	1.70	Up
Larval hindgut	4 ± 1	1 of 4	0.95	None
Larval fat body	3 ± 1	0 of 4	0.90	None
Larval trachea	3 ± 1	1 of 4	0.79	None
Larval carcass	4 ± 1	0 of 4	0.99	None
S2 cells (growing)	7 ± 0	2 of 4	1.66	Up
Whole fly	4 ± 0	0 of 4

Looking for FBgn0045485. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720