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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045502 through 18771 annotations produced 1 hits



Gustatory receptor 10a (Gr10a):

Annotation Number : CG32664
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045502
Gbrowse : chrX:11307532-11309602 (-) // 100.0 //
Probeset : 1630853_at
Accessions : protein= NP_727523;, nucleotide= NM_167283;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0045502.
VDRC has 2 RNAi stocks for FBgn0045502 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 1.00None
Head8 ± 20 of 4 3.80None
Eye3 ± 11 of 4 1.58None
Thoracicoabdominal ganglion4 ± 10 of 4 2.10None
Salivary gland11 ± 00 of 4 5.06Up
Crop6 ± 10 of 4 2.70None
Midgut3 ± 10 of 4 1.50None
Tubule4 ± 00 of 4 2.00Up
Hindgut1 ± 00 of 4 0.60None
Heart1 ± 00 of 4 0.50None
Fat body3 ± 10 of 4 1.39None
Ovary2 ± 00 of 4 1.10None
Testis2 ± 00 of 4 1.30None
Male accessory glands14 ± 21 of 4 6.40Up
Virgin spermatheca3 ± 00 of 4 1.60None
Mated spermatheca2 ± 00 of 4 1.19None
Adult carcass4 ± 10 of 4 1.80None
Larval CNS2 ± 10 of 4 1.02None
Larval Salivary gland4 ± 20 of 4 1.92None
Larval midgut11 ± 12 of 4 5.07Up
Larval tubule4 ± 10 of 4 1.90None
Larval hindgut3 ± 00 of 4 1.39None
Larval fat body1 ± 10 of 4 0.90None
Larval trachea10 ± 22 of 4 4.74Up
Larval carcass2 ± 10 of 4 1.12None
S2 cells (growing)2 ± 00 of 4 1.31None
Whole fly2 ± 10 of 4

Looking for FBgn0045502. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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