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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045866 through 18771 annotations produced 1 hits



baiser (bai):

Annotation Number : CG11785
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045866
Gbrowse : chr3R:20865096-20866172 (+) // 100.0 //
Probeset : 1631909_at
Accessions : protein= NP_651323;, nucleotide= NM_143066;
Pathway : oocyte
Interpro : germ-line encoded // inferred from mutant phenotype /// 0009953 // dorsal/ventral pattern formation // inferred from mu
FlyMine data for FBgn0045866.
VDRC has 1 RNAi stocks for FBgn0045866 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain542 84 of 4 0.60Down
Head849 334 of 4 1.00None
Eye1285 164 of 4 1.54Up
Thoracicoabdominal ganglion592 284 of 4 0.70Down
Salivary gland7751 2474 of 4 9.28Up
Crop868 304 of 4 1.00None
Midgut1392 314 of 4 1.70Up
Tubule968 574 of 4 1.20Up
Hindgut883 254 of 4 1.10None
Heart1057 444 of 4 1.26Up
Fat body1185 974 of 4 1.42Up
Ovary753 134 of 4 0.90None
Testis521 154 of 4 0.60Down
Male accessory glands6534 1934 of 4 7.80Up
Virgin spermatheca1706 484 of 4 2.04Up
Mated spermatheca1942 1134 of 4 2.32Up
Adult carcass908 434 of 4 1.10None
Larval CNS660 234 of 4 0.79Down
Larval Salivary gland5900 2574 of 4 7.06Up
Larval midgut1081 514 of 4 1.29Up
Larval tubule919 124 of 4 1.10None
Larval hindgut1011 274 of 4 1.21Up
Larval fat body1804 1624 of 4 2.20Up
Larval trachea1579 1734 of 4 1.89Up
Larval carcass1231 424 of 4 1.47Up
S2 cells (growing)1963 494 of 4 2.35Up
Whole fly835 294 of 4

Looking for FBgn0045866. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime