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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0045980 through 18771 annotations produced 1 hits



nimA-like kinase (niki):

Annotation Number : CG10951
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0045980
Gbrowse : chr3R:20648122-20651105 (-) // 100.0 //
Probeset : 1635964_at
Accessions : protein= NP_651293;, nucleotide= NM_143036;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0004672 // protein kinase activity // inferred
FlyMine data for FBgn0045980.
Homophila reports that CG10951 is a close match (5e-11) to human gene HHF5;INSR (NP_001073285), a gene associated with Diabetes mellitus, insulin-resistant, with acanthosis nigricans, 610549 (3);Hyperinsulinemic hypoglycemia, familial, 5, 609968 (3);Leprechaunism, 246200 (3);Rabson-Mendenhall syndrome, 262190 (3).
TRiP has 2 RNAi stocks for FBgn0045980 available for purchase.
VDRC has 3 RNAi stocks for FBgn0045980 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 01 of 4 0.80None
Head15 ± 14 of 4 1.40None
Eye4 ± 10 of 4 0.42Down
Thoracicoabdominal ganglion13 ± 12 of 4 1.20None
Salivary gland12 ± 40 of 4 1.11None
Crop8 ± 10 of 4 0.80None
Midgut8 ± 10 of 4 0.80None
Tubule9 ± 11 of 4 0.90None
Hindgut5 ± 20 of 4 0.50None
Heart3 ± 10 of 4 0.29Down
Fat body8 ± 41 of 4 0.74None
Ovary5 ± 11 of 4 0.50None
Testis8 ± 13 of 4 0.70None
Male accessory glands8 ± 40 of 4 0.80None
Virgin spermatheca5 ± 21 of 4 0.46None
Mated spermatheca7 ± 00 of 4 0.65None
Adult carcass16 ± 40 of 4 1.50None
Larval CNS7 ± 13 of 4 0.64None
Larval Salivary gland6 ± 10 of 4 0.59None
Larval midgut5 ± 20 of 4 0.52None
Larval tubule12 ± 14 of 4 1.10None
Larval hindgut7 ± 10 of 4 0.67None
Larval fat body64 ± 44 of 4 5.80Up
Larval trachea5 ± 20 of 4 0.49None
Larval carcass7 ± 20 of 4 0.68None
S2 cells (growing)8 ± 04 of 4 0.79None
Whole fly11 ± 22 of 4

Looking for FBgn0045980. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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