FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0046258 through 18771 annotations produced 1 hits

(CG12880):

Annotation Number : CG12880
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0046258
Gbrowse : chr3R:23511683-23518514 (+) // 100.0 //
Probeset : 1627721_at
Accessions : protein= NP_651580;, nucleotide= NM_143323;
FlyMine data for FBgn0046258.
VDRC has 3 RNAi stocks for FBgn0046258 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	17 ± 1	4 of 4	0.40	Down
Head	20 ± 2	4 of 4	0.40	Down
Eye	37 ± 2	4 of 4	0.81	None
Thoracicoabdominal ganglion	22 ± 1	4 of 4	0.50	Down
Salivary gland	20 ± 3	2 of 4	0.43	Down
Crop	11 ± 0	3 of 4	0.30	Down
Midgut	10 ± 0	4 of 4	0.20	Down
Tubule	12 ± 1	1 of 4	0.30	Down
Hindgut	11 ± 1	4 of 4	0.20	Down
Heart	8 ± 1	3 of 4	0.17	Down
Fat body	31 ± 19	3 of 4	0.66	None
Ovary	69 ± 9	4 of 4	1.50	None
Testis	51 ± 3	4 of 4	1.10	None
Male accessory glands	156 ± 7	4 of 4	3.30	Up
Virgin spermatheca	50 ± 6	4 of 4	1.07	None
Mated spermatheca	49 ± 16	4 of 4	1.04	None
Adult carcass	13 ± 4	2 of 4	0.30	Down
Larval CNS	102 ± 2	4 of 4	2.17	Up
Larval Salivary gland	8 ± 0	0 of 4	0.18	Down
Larval midgut	10 ± 1	4 of 4	0.22	Down
Larval tubule	9 ± 1	1 of 4	0.20	Down
Larval hindgut	26 ± 3	4 of 4	0.55	Down
Larval fat body	16 ± 1	2 of 4	0.40	Down
Larval trachea	143 ± 20	4 of 4	3.05	Up
Larval carcass	92 ± 11	4 of 4	1.97	Up
S2 cells (growing)	5 ± 1	1 of 4	0.11	Down
Whole fly	47 ± 5	4 of 4

Looking for FBgn0046258. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720