Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0046776 through 18771 annotations produced 1 hits



(CR14033):

Annotation Number : CG14033
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0046776
Gbrowse : chr2L:5242706-5244239 (+) // 100.0 //
Probeset : 1630660_at
Accessions : protein= NP_723071;, nucleotide= NM_164636;
FlyMine data for FBgn0046776.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain37 34 of 4 0.20Down
Head19 11 of 4 0.10Down
Eye20 14 of 4 0.10Down
Thoracicoabdominal ganglion64 34 of 4 0.30Down
Salivary gland5 30 of 4 0.03Down
Crop5 10 of 4 0.00Down
Midgut152 94 of 4 0.80Down
Tubule6 40 of 4 0.00Down
Hindgut37 14 of 4 0.20Down
Heart107 84 of 4 0.54Down
Fat body3 30 of 4 0.02Down
Ovary407 254 of 4 2.10Up
Testis43 04 of 4 0.20Down
Male accessory glands25 41 of 4 0.10Down
Virgin spermatheca150 114 of 4 0.76Down
Mated spermatheca157 214 of 4 0.80None
Adult carcass10 50 of 4 0.10Down
Larval CNS27 34 of 4 0.14Down
Larval Salivary gland1 00 of 4 0.01Down
Larval midgut60 54 of 4 0.30Down
Larval tubule2 20 of 4 0.00Down
Larval hindgut20 34 of 4 0.10Down
Larval fat body23 31 of 4 0.10Down
Larval trachea6 30 of 4 0.03Down
Larval carcass8 20 of 4 0.04Down
S2 cells (growing)78 24 of 4 0.40Down
Whole fly197 104 of 4

Looking for FBgn0046776. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime