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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0046886 through 18771 annotations produced 1 hits



Gustatory receptor 98c (Gr98c):

Annotation Number : CG31060
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0046886
Gbrowse : chr3R:23370164-23371558 (+) // 100.0 //
Probeset : 1632610_at
Accessions : protein= NP_524531;, nucleotide= NM_079807;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0004871 // signal transducer activity // inferred from electronic annotation /// 0004872 // receptor activity // inferre
FlyMine data for FBgn0046886.
TRiP has 1 RNAi stocks for FBgn0046886 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 1.30None
Head1 ± 00 of 4 1.50None
Eye1 ± 10 of 4 2.68None
Thoracicoabdominal ganglion1 ± 00 of 4 2.30None
Salivary gland3 ± 10 of 4 5.07None
Crop1 ± 00 of 4 2.00None
Midgut3 ± 00 of 4 4.30None
Tubule5 ± 00 of 4 7.30Up
Hindgut2 ± 00 of 4 2.90None
Heart2 ± 10 of 4 3.29None
Fat body1 ± 10 of 4 2.57None
Ovary0 ± 00 of 4 0.80None
Testis0 ± 00 of 4 0.60None
Male accessory glands4 ± 10 of 4 6.00None
Virgin spermatheca4 ± 20 of 4 6.25None
Mated spermatheca10 ± 20 of 414.54Up
Adult carcass5 ± 20 of 4 7.10None
Larval CNS1 ± 10 of 4 2.07None
Larval Salivary gland2 ± 10 of 4 3.25None
Larval midgut1 ± 00 of 4 2.07None
Larval tubule1 ± 00 of 4 1.60None
Larval hindgut3 ± 00 of 4 4.75Up
Larval fat body5 ± 10 of 4 8.00None
Larval trachea1 ± 10 of 4 1.86None
Larval carcass2 ± 10 of 4 2.96None
S2 cells (growing)0 ± 00 of 4 1.11None
Whole fly0 ± 00 of 4

Looking for FBgn0046886. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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