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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0047178 through 18771 annotations produced 1 hits



(CG32147):

Annotation Number : CG32147
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0047178
Gbrowse : chr3L:15136160-15137125 (-) // 100.0 //
Probeset : 1632593_at
Accessions : protein= NP_730035;, nucleotide= NM_168616;
Interpro : 0016787 // hydrolase activity // inferred from electronic annotation /// 0016920 // pyroglutamyl-peptidase activity // i
FlyMine data for FBgn0047178.
BDGP gene expression has embryonic in situ data for BcDNA:RE07960: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0047178 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain114 34 of 4 1.00None
Head117 54 of 4 1.00None
Eye108 34 of 4 0.90Down
Thoracicoabdominal ganglion193 74 of 4 1.60Up
Salivary gland1390 264 of 411.58Up
Crop297 104 of 4 2.50Up
Midgut109 74 of 4 0.90None
Tubule966 854 of 4 8.00Up
Hindgut308 64 of 4 2.60Up
Heart177 104 of 4 1.48Up
Fat body117 144 of 4 0.97None
Ovary181 34 of 4 1.50Up
Testis19 24 of 4 0.20Down
Male accessory glands91 14 of 4 0.80Down
Virgin spermatheca110 54 of 4 0.92None
Mated spermatheca130 44 of 4 1.08None
Adult carcass131 64 of 4 1.10None
Larval CNS166 194 of 4 1.38Up
Larval Salivary gland206 274 of 4 1.71None
Larval midgut115 104 of 4 0.96None
Larval tubule292 54 of 4 2.40Up
Larval hindgut323 214 of 4 2.69Up
Larval fat body34 43 of 4 0.30Down
Larval trachea293 364 of 4 2.44Up
Larval carcass173 54 of 4 1.44Up
S2 cells (growing)160 34 of 4 1.33Up
Whole fly120 24 of 4

Looking for FBgn0047178. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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