Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0047330 through 18771 annotations produced 1 hits



(CG32235):

Annotation Number : CG32235
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0047330
Gbrowse : chr3L:4859808-4860470 (-) // 100.0 //
Probeset : 1640919_at
Accessions : protein= NP_729038;, nucleotide= NM_168105;
FlyMine data for FBgn0047330.
VDRC has 4 RNAi stocks for FBgn0047330 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.50None
Head1 ± 00 of 4 1.20None
Eye0 ± 00 of 4 0.93None
Thoracicoabdominal ganglion0 ± 00 of 4 0.80None
Salivary gland2 ± 10 of 4 2.90None
Crop3 ± 10 of 4 3.20None
Midgut1 ± 00 of 4 1.40None
Tubule2 ± 00 of 4 2.80Up
Hindgut2 ± 10 of 4 2.90None
Heart2 ± 10 of 4 2.58None
Fat body0 ± 00 of 4 0.80None
Ovary0 ± 00 of 4 0.80None
Testis1 ± 00 of 4 1.20None
Male accessory glands4 ± 10 of 4 4.10None
Virgin spermatheca1 ± 10 of 4 1.93None
Mated spermatheca1 ± 00 of 4 0.98None
Adult carcass1 ± 00 of 4 1.50None
Larval CNS1 ± 10 of 4 1.15None
Larval Salivary gland2 ± 10 of 4 2.93None
Larval midgut1 ± 00 of 4 1.63None
Larval tubule1 ± 10 of 4 1.90None
Larval hindgut2 ± 10 of 4 2.43None
Larval fat body3 ± 20 of 4 3.40None
Larval trachea1 ± 00 of 4 1.32None
Larval carcass3 ± 20 of 4 3.00None
S2 cells (growing)1 ± 00 of 4 1.23None
Whole fly1 ± 00 of 4

Looking for FBgn0047330. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime