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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050015 through 18771 annotations produced 1 hits



CG7701 (CG30015):

Annotation Number : CG30015
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050015
Gbrowse : chr2R:6726598-6762229 (-) // 100.0 //
Probeset : 1632974_s_at
Accessions : protein= NP_001097262; /// NP_001097263; /// NP_610621; /// NP_724980;, nucleotide= NM_001103792; /// NM_001103793; /// NM_136777; /// NM_165802;
FlyMine data for FBgn0050015.
VDRC has 3 RNAi stocks for FBgn0050015 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain457 484 of 4 2.50Up
Head323 434 of 4 1.80Up
Eye308 234 of 4 1.70Up
Thoracicoabdominal ganglion312 144 of 4 1.70Up
Salivary gland455 154 of 4 2.51Up
Crop257 114 of 4 1.40Up
Midgut432 74 of 4 2.40Up
Tubule37 34 of 4 0.20Down
Hindgut413 214 of 4 2.30Up
Heart307 104 of 4 1.70Up
Fat body822 924 of 4 4.54Up
Ovary25 34 of 4 0.10Down
Testis373 44 of 4 2.10Up
Male accessory glands130 64 of 4 0.70Down
Virgin spermatheca815 384 of 4 4.50Up
Mated spermatheca611 294 of 4 3.37Up
Adult carcass259 84 of 4 1.40Up
Larval CNS336 124 of 4 1.86Up
Larval Salivary gland1573 644 of 4 8.68Up
Larval midgut343 394 of 4 1.90Up
Larval tubule65 54 of 4 0.40Down
Larval hindgut383 184 of 4 2.12Up
Larval fat body75 144 of 4 0.40Down
Larval trachea275 294 of 4 1.52Up
Larval carcass340 284 of 4 1.88Up
S2 cells (growing)310 184 of 4 1.71Up
Whole fly181 134 of 4

Looking for FBgn0050015. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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