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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050018 through 18771 annotations produced 1 hits



methuselah-like 13 (mthl13):

Annotation Number : CG30018
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050018
Gbrowse : chr2R:6678939-6680614 (+) // 100.0 //
Probeset : 1633295_a_at
Accessions : protein= NP_788325;, nucleotide= NM_176145;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : 0004888 // transmembrane receptor activity // inferred from electronic annotation /// 0004930 // G-protein coupled recep
FlyMine data for FBgn0050018.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain6 ± 03 of 4 1.40None
Head6 ± 13 of 4 1.40None
Eye2 ± 00 of 4 0.65None
Thoracicoabdominal ganglion6 ± 22 of 4 1.50None
Salivary gland19 ± 32 of 4 4.24Up
Crop9 ± 14 of 4 2.10Up
Midgut6 ± 03 of 4 1.40None
Tubule7 ± 01 of 4 1.60Up
Hindgut7 ± 02 of 4 1.70None
Heart3 ± 11 of 4 0.72None
Fat body12 ± 34 of 4 2.75Up
Ovary2 ± 01 of 4 0.60None
Testis4 ± 10 of 4 1.00None
Male accessory glands12 ± 13 of 4 2.70Up
Virgin spermatheca4 ± 11 of 4 0.92None
Mated spermatheca7 ± 12 of 4 1.63None
Adult carcass9 ± 12 of 4 2.10None
Larval CNS3 ± 11 of 4 0.80None
Larval Salivary gland6 ± 12 of 4 1.32None
Larval midgut4 ± 01 of 4 1.07None
Larval tubule6 ± 03 of 4 1.30None
Larval hindgut4 ± 13 of 4 1.04None
Larval fat body6 ± 22 of 4 1.40None
Larval trachea2 ± 11 of 4 0.65None
Larval carcass6 ± 02 of 4 1.48None
S2 cells (growing)4 ± 02 of 4 1.04None
Whole fly4 ± 13 of 4

Looking for FBgn0050018. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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