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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050067 through 18771 annotations produced 1 hits



Odorant-binding protein 50a (Obp50a):

Annotation Number : CG30067
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050067
Gbrowse : chr2R:10257868-10258529 (-) // 100.0 //
Probeset : 1624828_at
Accessions : protein= NP_725385; /// NP_995832;, nucleotide= NM_166050; /// NM_206110;
Interpro : 0005549 // odorant binding // not recorded
FlyMine data for FBgn0050067.
TRiP has 1 RNAi stocks for FBgn0050067 available for purchase.
VDRC has 1 RNAi stocks for FBgn0050067 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.20None
Head1 ± 00 of 4 0.50None
Eye1 ± 00 of 4 0.36None
Thoracicoabdominal ganglion3 ± 10 of 4 0.90None
Salivary gland2 ± 00 of 4 0.55None
Crop7 ± 20 of 4 1.90None
Midgut3 ± 10 of 4 0.80None
Tubule3 ± 00 of 4 1.00None
Hindgut4 ± 10 of 4 1.20None
Heart2 ± 00 of 4 0.51None
Fat body6 ± 30 of 4 1.58None
Ovary2 ± 00 of 4 0.50None
Testis11 ± 12 of 4 2.90Up
Male accessory glands5 ± 20 of 4 1.40None
Virgin spermatheca3 ± 10 of 4 0.96None
Mated spermatheca4 ± 10 of 4 1.16None
Adult carcass14 ± 41 of 4 3.60None
Larval CNS2 ± 10 of 4 0.73None
Larval Salivary gland3 ± 00 of 4 0.78None
Larval midgut5 ± 20 of 4 1.33None
Larval tubule4 ± 10 of 4 1.20None
Larval hindgut5 ± 10 of 4 1.45None
Larval fat body6 ± 20 of 4 1.70None
Larval trachea2 ± 20 of 4 0.64None
Larval carcass4 ± 20 of 4 1.25None
S2 cells (growing)2 ± 10 of 4 0.70None
Whole fly4 ± 10 of 4

Looking for FBgn0050067. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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