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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050074 through 18771 annotations produced 1 hits



Odorant-binding protein 50d (Obp50d):

Annotation Number : CG30074
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050074
Gbrowse : chr2R:10260628-10261264 (+) // 100.0 //
Probeset : 1625659_at
Accessions : protein= NP_725388;, nucleotide= NM_166053;
Interpro : 0005549 // odorant binding // inferred from electronic annotation /// 0005549 // odorant binding // not recorded
FlyMine data for FBgn0050074.
VDRC has 1 RNAi stocks for FBgn0050074 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 0.40None
Head4 10 of 4 0.70None
Eye2 00 of 4 0.48None
Thoracicoabdominal ganglion5 30 of 4 0.90None
Salivary gland4 00 of 4 0.66None
Crop4 10 of 4 0.70None
Midgut4 00 of 4 0.80None
Tubule5 00 of 4 1.00None
Hindgut5 10 of 4 0.90None
Heart4 00 of 4 0.66None
Fat body7 30 of 4 1.20None
Ovary1 00 of 4 0.20Down
Testis17 14 of 4 2.90Up
Male accessory glands3 10 of 4 0.50None
Virgin spermatheca5 10 of 4 0.87None
Mated spermatheca6 20 of 4 1.07None
Adult carcass6 00 of 4 1.10None
Larval CNS1 00 of 4 0.17Down
Larval Salivary gland6 11 of 4 1.11None
Larval midgut1 00 of 4 0.25Down
Larval tubule3 10 of 4 0.50None
Larval hindgut4 10 of 4 0.78None
Larval fat body4 10 of 4 0.70None
Larval trachea3 30 of 4 0.55None
Larval carcass32 102 of 4 5.28None
S2 cells (growing)2 00 of 4 0.40None
Whole fly6 10 of 4

Looking for FBgn0050074. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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