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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050076 through 18771 annotations produced 1 hits



(CG30076):

Annotation Number : CG30076
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050076
Gbrowse : chr2R:10431941-10433264 (-) // 100.0 //
Probeset : 1635855_at
Accessions : protein= NP_725400;, nucleotide= NM_166059;
FlyMine data for FBgn0050076.
VDRC has 2 RNAi stocks for FBgn0050076 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 1.40None
Head2 ± 10 of 4 1.30None
Eye0 ± 00 of 4 0.41None
Thoracicoabdominal ganglion1 ± 00 of 4 0.90None
Salivary gland9 ± 30 of 4 4.35None
Crop5 ± 10 of 4 2.30None
Midgut4 ± 10 of 4 2.00None
Tubule2 ± 00 of 4 0.90None
Hindgut3 ± 10 of 4 1.60None
Heart1 ± 00 of 4 0.53None
Fat body2 ± 00 of 4 0.93None
Ovary1 ± 00 of 4 0.70None
Testis2 ± 00 of 4 1.00None
Male accessory glands2 ± 00 of 4 1.10None
Virgin spermatheca1 ± 00 of 4 0.85None
Mated spermatheca1 ± 00 of 4 0.63None
Adult carcass7 ± 30 of 4 3.60None
Larval CNS1 ± 00 of 4 0.65None
Larval Salivary gland4 ± 10 of 4 2.23None
Larval midgut6 ± 30 of 4 3.19None
Larval tubule2 ± 00 of 4 1.30None
Larval hindgut1 ± 00 of 4 0.76None
Larval fat body6 ± 30 of 4 3.10None
Larval trachea1 ± 20 of 4 0.81None
Larval carcass4 ± 10 of 4 2.10None
S2 cells (growing)2 ± 00 of 4 0.98None
Whole fly2 ± 00 of 4

Looking for FBgn0050076. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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