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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0050081 through 18771 annotations produced 1 hits

CG30081 (Ir51b):

Annotation Number : CG30081
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050081
Gbrowse : chr2R:11095497-11097291 (+) // 100.0 //
Probeset : 1623976_at
Accessions : protein= NP_725440;, nucleotide= NM_166080;
FlyMine data for FBgn0050081.
VDRC has 2 RNAi stocks for FBgn0050081 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.40None
Head0 00 of 4 0.50None
Eye0 00 of 4 0.46None
Thoracicoabdominal ganglion1 10 of 4 1.10None
Salivary gland4 10 of 4 3.26None
Crop1 00 of 4 0.90None
Midgut2 10 of 4 1.80None
Tubule1 00 of 4 1.40None
Hindgut0 00 of 4 0.60None
Heart0 00 of 4 0.30None
Fat body3 30 of 4 2.11None
Ovary1 10 of 4 1.10None
Testis2 00 of 4 1.80None
Male accessory glands3 10 of 4 2.70None
Virgin spermatheca2 00 of 4 1.39None
Mated spermatheca2 10 of 4 1.63None
Adult carcass1 00 of 4 1.10None
Larval CNS0 00 of 4 0.30None
Larval Salivary gland1 00 of 4 0.72None
Larval midgut1 00 of 4 1.23None
Larval tubule0 00 of 4 0.50None
Larval hindgut2 10 of 4 1.47None
Larval fat body1 00 of 4 1.20None
Larval trachea1 10 of 4 0.96None
Larval carcass0 00 of 4 0.68None
S2 cells (growing)1 00 of 4 0.81None
Whole fly1 00 of 4

Looking for FBgn0050081. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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