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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0050091 through 18771 annotations produced 1 hits


Annotation Number : CG30091
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050091
Gbrowse : chr2R:11568075-11569908 (+) // 100.0 //
Probeset : 1632210_at
Accessions : protein= NP_725484;, nucleotide= NM_166110;
Interpro : 0003824 // catalytic activity // inferred from electronic annotation /// 0004252 // serine-type endopeptidase activity /
FlyMine data for FBgn0050091.
Homophila reports that CG30091 is a close match (2e-12) to human gene PRSS1;TRY1 (NP_002760), a gene associated with Pancreatitis, hereditary, 167800 (3);Trypsinogen deficiency (1).
VDRC has 3 RNAi stocks for FBgn0050091 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 00 of 4 2.00None
Head0 00 of 4 0.70None
Eye1 00 of 4 0.86None
Thoracicoabdominal ganglion2 10 of 4 2.20None
Salivary gland10 31 of 4 8.49None
Crop0 00 of 4 0.60None
Midgut2 00 of 4 2.20None
Tubule4 00 of 4 3.40Up
Hindgut1 00 of 4 1.30None
Heart3 00 of 4 2.90None
Fat body1 00 of 4 0.75None
Ovary2 00 of 4 1.60None
Testis2 10 of 4 1.70None
Male accessory glands3 20 of 4 2.90None
Virgin spermatheca6 10 of 4 4.94Up
Mated spermatheca2 10 of 4 2.18None
Adult carcass8 40 of 4 6.70None
Larval CNS1 00 of 4 1.06None
Larval Salivary gland10 21 of 4 8.20Up
Larval midgut12 12 of 4 9.84Up
Larval tubule6 10 of 4 5.10Up
Larval hindgut14 14 of 411.55Up
Larval fat body604 674 of 4474.30Up
Larval trachea5 41 of 4 4.51None
Larval carcass3 10 of 4 3.04None
S2 cells (growing)0 00 of 4 0.65None
Whole fly1 00 of 4

Looking for FBgn0050091. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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