Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050094 through 18771 annotations produced 1 hits



(CG30094):

Annotation Number : CG30094
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050094
Gbrowse : chr2R:12029736-12030443 (+) // 100.0 //
Probeset : 1635887_at
Accessions : protein= NP_725535;, nucleotide= NM_166149;
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from ele
FlyMine data for FBgn0050094.
VDRC has 1 RNAi stocks for FBgn0050094 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain83 ± 34 of 4 1.20None
Head53 ± 44 of 4 0.70Down
Eye62 ± 34 of 4 0.87None
Thoracicoabdominal ganglion73 ± 24 of 4 1.00None
Salivary gland62 ± 60 of 4 0.87None
Crop45 ± 14 of 4 0.60Down
Midgut41 ± 30 of 4 0.60Down
Tubule36 ± 24 of 4 0.50Down
Hindgut46 ± 24 of 4 0.60Down
Heart45 ± 34 of 4 0.63Down
Fat body39 ± 74 of 4 0.55Down
Ovary99 ± 14 of 4 1.40Up
Testis299 ± 94 of 4 4.20Up
Male accessory glands46 ± 14 of 4 0.60Down
Virgin spermatheca36 ± 54 of 4 0.51Down
Mated spermatheca37 ± 44 of 4 0.53Down
Adult carcass40 ± 33 of 4 0.60Down
Larval CNS59 ± 24 of 4 0.83None
Larval Salivary gland71 ± 104 of 4 0.99None
Larval midgut32 ± 20 of 4 0.45Down
Larval tubule46 ± 24 of 4 0.60Down
Larval hindgut27 ± 24 of 4 0.38Down
Larval fat body73 ± 124 of 4 1.00None
Larval trachea47 ± 44 of 4 0.65Down
Larval carcass38 ± 24 of 4 0.54Down
S2 cells (growing)71 ± 24 of 4 0.99None
Whole fly72 ± 44 of 4

Looking for FBgn0050094. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime