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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050095 through 18771 annotations produced 1 hits



(CG30095):

Annotation Number : CG30095
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050095
Gbrowse : chr2R:12010942-12012082 (+) // 100.0 //
Probeset : 1632085_at
Accessions : protein= NP_725529;, nucleotide= NM_166143;
Interpro : 0016491 // oxidoreductase activity // inferred from electronic annotation
FlyMine data for FBgn0050095.
VDRC has 5 RNAi stocks for FBgn0050095 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 00 of 4 0.30None
Head1 00 of 4 0.60None
Eye2 10 of 4 0.70None
Thoracicoabdominal ganglion1 00 of 4 0.40Down
Salivary gland1 00 of 4 0.58None
Crop4 00 of 4 1.50Up
Midgut2 00 of 4 0.70None
Tubule1 00 of 4 0.60Down
Hindgut5 10 of 4 1.70None
Heart1 00 of 4 0.66None
Fat body2 20 of 4 0.97None
Ovary0 00 of 4 0.20Down
Testis0 00 of 4 0.30Down
Male accessory glands1 00 of 4 0.40Down
Virgin spermatheca3 10 of 4 1.06None
Mated spermatheca1 00 of 4 0.62None
Adult carcass4 10 of 4 1.40None
Larval CNS1 00 of 4 0.34Down
Larval Salivary gland0 00 of 4 0.27Down
Larval midgut2 10 of 4 0.87None
Larval tubule1 00 of 4 0.60None
Larval hindgut2 10 of 4 0.98None
Larval fat body6 30 of 4 2.20None
Larval trachea1 10 of 4 0.43None
Larval carcass2 00 of 4 0.96None
S2 cells (growing)0 00 of 4 0.16Down
Whole fly3 00 of 4

Looking for FBgn0050095. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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