Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050100 through 18771 annotations produced 1 hits



/// (CG30100 /// CG42372):

Annotation Number : CG30100
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050100 /// FBgn0259718
Gbrowse : chr2R:12178957-12179760 (+) // 100.0 //
Probeset : 1637768_at
Accessions : protein= NP_001137677; /// NP_001137678; /// NP_725560;, nucleotide= NM_001144205; /// NM_001144206; /// NM_166161;
Interpro : 0003747 // translation release factor activity // inferred from electronic annotation
FlyMine data for FBgn0050100 /// FBgn0259718.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain99 ± 24 of 4 0.80Down
Head85 ± 44 of 4 0.70Down
Eye78 ± 44 of 4 0.66Down
Thoracicoabdominal ganglion91 ± 54 of 4 0.80Down
Salivary gland127 ± 74 of 4 1.08None
Crop111 ± 74 of 4 0.90None
Midgut146 ± 74 of 4 1.20Up
Tubule128 ± 94 of 4 1.10None
Hindgut113 ± 64 of 4 1.00None
Heart114 ± 34 of 4 0.97None
Fat body91 ± 84 of 4 0.78Down
Ovary200 ± 44 of 4 1.70Up
Testis26 ± 04 of 4 0.20Down
Male accessory glands154 ± 64 of 4 1.30Up
Virgin spermatheca65 ± 44 of 4 0.55Down
Mated spermatheca72 ± 14 of 4 0.61Down
Adult carcass85 ± 24 of 4 0.70Down
Larval CNS167 ± 204 of 4 1.42Up
Larval Salivary gland68 ± 24 of 4 0.58Down
Larval midgut86 ± 34 of 4 0.73Down
Larval tubule159 ± 44 of 4 1.40Up
Larval hindgut95 ± 54 of 4 0.81Down
Larval fat body76 ± 74 of 4 0.70Down
Larval trachea157 ± 134 of 4 1.34Up
Larval carcass117 ± 84 of 4 0.99None
S2 cells (growing)135 ± 84 of 4 1.15None
Whole fly117 ± 24 of 4

Looking for FBgn0050100. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime