FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0050106 through 18771 annotations produced 1 hits

(CG30106):

Annotation Number : CG30106
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050106
Gbrowse : chr2R:13535036-13541801 (-) // 100.0 //
Probeset : 1628222_at
Accessions : protein= NP_611241;, nucleotide= NM_137397;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004946 // bombesin receptor activity // inferre
FlyMine data for FBgn0050106.
Homophila reports that CG30106 is a close match (9e-11) to human gene HTR2A (NP_000612), a gene associated with {Alcohol dependence, susceptibility to}, 103780 (3);{Anorexia nervosa, susceptibility to}, 606788 (3);{Major depressive disorder, response to citalopram therapy in}, 608516 (3);{Obsessive-compulsive disorder, susceptibility to}, 164230 (3);{Schizophrenia, susceptibility to}, 181500 (3);{Seasonal affective disorder, susceptibility to}, 608516 (3).
TRiP has 1 RNAi stocks for FBgn0050106 available for purchase.
VDRC has 2 RNAi stocks for FBgn0050106 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 1	0 of 4	2.00	Up
Head	8 ± 3	0 of 4	1.10	None
Eye	1 ± 0	0 of 4	0.22	Down
Thoracicoabdominal ganglion	21 ± 1	1 of 4	2.90	Up
Salivary gland	4 ± 2	0 of 4	0.69	None
Crop	9 ± 1	0 of 4	1.30	None
Midgut	10 ± 1	0 of 4	1.50	None
Tubule	2 ± 0	0 of 4	0.30	Down
Hindgut	36 ± 1	4 of 4	5.20	Up
Heart	14 ± 1	3 of 4	2.01	Up
Fat body	5 ± 1	0 of 4	0.73	None
Ovary	2 ± 0	0 of 4	0.30	None
Testis	8 ± 1	0 of 4	1.30	None
Male accessory glands	18 ± 0	0 of 4	2.60	Up
Virgin spermatheca	4 ± 2	0 of 4	0.62	None
Mated spermatheca	5 ± 1	0 of 4	0.80	None
Adult carcass	5 ± 2	0 of 4	0.80	None
Larval CNS	7 ± 1	0 of 4	1.12	None
Larval Salivary gland	5 ± 3	0 of 4	0.76	None
Larval midgut	4 ± 2	0 of 4	0.69	None
Larval tubule	1 ± 0	0 of 4	0.30	None
Larval hindgut	10 ± 1	0 of 4	1.41	None
Larval fat body	9 ± 4	0 of 4	1.40	None
Larval trachea	1 ± 1	0 of 4	0.21	Down
Larval carcass	4 ± 1	0 of 4	0.65	None
S2 cells (growing)	5 ± 1	0 of 4	0.79	None
Whole fly	7 ± 1	0 of 4

Looking for FBgn0050106. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720