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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050147 through 18771 annotations produced 1 hits



D-hillarin (Hil):

Annotation Number : CG30147
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050147
Gbrowse : chr2R:16494385-16505719 (-) // 100.0 //
Probeset : 1623227_s_at
Accessions : protein= NP_611493; /// NP_725980;, nucleotide= NM_137649; /// NM_166402;
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation /// 0046872 // metal ion binding // inferred from ele
FlyMine data for FBgn0050147.
BioGrid reports that CG30147 interacts with CG4279 CG31092 CG3937 CG4167 CG4326 CG7001 CG7823 CG8368 .
VDRC has 3 RNAi stocks for FBgn0050147 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 14 of 4 0.40Down
Head66 24 of 4 2.50Up
Eye156 84 of 4 5.95Up
Thoracicoabdominal ganglion12 04 of 4 0.50Down
Salivary gland57 14 of 4 2.20Up
Crop115 54 of 4 4.40Up
Midgut5 21 of 4 0.20Down
Tubule10 02 of 4 0.40Down
Hindgut195 104 of 4 7.40Up
Heart28 24 of 4 1.08None
Fat body19 24 of 4 0.74None
Ovary21 24 of 4 0.80None
Testis15 04 of 4 0.60Down
Male accessory glands4 10 of 4 0.20Down
Virgin spermatheca44 24 of 4 1.69Up
Mated spermatheca48 54 of 4 1.83Up
Adult carcass52 44 of 4 2.00Up
Larval CNS43 14 of 4 1.64Up
Larval Salivary gland16 14 of 4 0.62Down
Larval midgut7 11 of 4 0.26Down
Larval tubule1 00 of 4 0.00Down
Larval hindgut266 24 of 410.14Up
Larval fat body5 20 of 4 0.20Down
Larval trachea138 114 of 4 5.29Up
Larval carcass120 74 of 4 4.59Up
S2 cells (growing)80 34 of 4 3.05Up
Whole fly26 24 of 4

Looking for FBgn0050147. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime