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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050151 through 18771 annotations produced 1 hits



(CG30151):

Annotation Number : CG30151
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050151
Gbrowse : chr2R:16416096-16416969 (-) // 100.0 //
Probeset : 1634789_at
Accessions : protein= NP_725968;, nucleotide= NM_166396;
FlyMine data for FBgn0050151.
BDGP gene expression has embryonic in situ data for CG30151: 7 pix of staining in 1 body parts.
VDRC has 1 RNAi stocks for FBgn0050151 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain2 ± 00 of 4 0.10Down
Head65 ± 24 of 4 2.50Up
Eye19 ± 24 of 4 0.75None
Thoracicoabdominal ganglion2 ± 00 of 4 0.10Down
Salivary gland8 ± 20 of 4 0.32Down
Crop235 ± 64 of 4 9.00Up
Midgut1 ± 00 of 4 0.10Down
Tubule6 ± 20 of 4 0.20Down
Hindgut86 ± 44 of 4 3.30Up
Heart60 ± 54 of 4 2.32Up
Fat body155 ± 154 of 4 5.95Up
Ovary0 ± 00 of 4 0.00Down
Testis3 ± 10 of 4 0.10Down
Male accessory glands20 ± 22 of 4 0.80None
Virgin spermatheca165 ± 74 of 4 6.33Up
Mated spermatheca138 ± 54 of 4 5.32Up
Adult carcass81 ± 34 of 4 3.10Up
Larval CNS0 ± 00 of 4 0.03Down
Larval Salivary gland6 ± 30 of 4 0.24Down
Larval midgut0 ± 00 of 4 0.03Down
Larval tubule1 ± 00 of 4 0.00Down
Larval hindgut130 ± 84 of 4 4.99Up
Larval fat body78 ± 94 of 4 3.00Up
Larval trachea57 ± 104 of 4 2.18Up
Larval carcass3 ± 10 of 4 0.13Down
S2 cells (growing)2 ± 10 of 4 0.08Down
Whole fly26 ± 14 of 4

Looking for FBgn0050151. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime