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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050157 through 18771 annotations produced 1 hits



(CG30157):

Annotation Number : CG30157
Flybase ID : FBgn0050157
Gbrowse : chr2R:2861607-2862374 (-) // 100.0 //
Probeset : 1627153_at
Accessions : protein= NP_724519;, nucleotide= NM_165499;
Interpro : 0008233 // peptidase activity // inferred from electronic annotation /// 0008234 // cysteine-type peptidase activity //
FlyMine data for FBgn0050157.
VDRC has 1 RNAi stocks for FBgn0050157 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain11 11 of 4 0.50Down
Head14 20 of 4 0.70None
Eye10 22 of 4 0.49Down
Thoracicoabdominal ganglion10 11 of 4 0.50Down
Salivary gland24 70 of 4 1.14None
Crop19 30 of 4 0.90None
Midgut22 20 of 4 1.00None
Tubule31 32 of 4 1.50Up
Hindgut28 20 of 4 1.30None
Heart11 10 of 4 0.54Down
Fat body28 41 of 4 1.30None
Ovary12 00 of 4 0.60Down
Testis156 74 of 4 7.20Up
Male accessory glands38 31 of 4 1.80Up
Virgin spermatheca30 23 of 4 1.41Up
Mated spermatheca41 34 of 4 1.89Up
Adult carcass22 20 of 4 1.00None
Larval CNS10 20 of 4 0.49Down
Larval Salivary gland50 34 of 4 2.30Up
Larval midgut40 32 of 4 1.84Up
Larval tubule32 10 of 4 1.50Up
Larval hindgut24 10 of 4 1.11None
Larval fat body34 41 of 4 1.60None
Larval trachea21 33 of 4 0.96None
Larval carcass26 40 of 4 1.22None
S2 cells (growing)37 13 of 4 1.74Up
Whole fly21 21 of 4

Looking for FBgn0050157. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime