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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050184 through 18771 annotations produced 1 hits



(CG30184):

Annotation Number : CG30184
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050184
Gbrowse : chr2R:19451601-19452273 (+) // 100.0 //
Probeset : 1634801_at
Accessions : protein= NP_726341;, nucleotide= NM_166608;
Interpro : "0004623 // phospholipase A2 activity // inferred from electronic annotation /// 0016773 // phosphotransferase activity
FlyMine data for FBgn0050184.
VDRC has 2 RNAi stocks for FBgn0050184 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 11 of 4 0.20Down
Head11 24 of 4 0.60None
Eye9 11 of 4 0.52Down
Thoracicoabdominal ganglion6 10 of 4 0.40Down
Salivary gland20 40 of 4 1.19None
Crop11 21 of 4 0.60None
Midgut13 31 of 4 0.80None
Tubule6 10 of 4 0.40Down
Hindgut6 01 of 4 0.40Down
Heart4 10 of 4 0.24Down
Fat body15 00 of 4 0.91None
Ovary5 10 of 4 0.30Down
Testis156 74 of 4 9.10Up
Male accessory glands4 10 of 4 0.20Down
Virgin spermatheca4 20 of 4 0.27Down
Mated spermatheca4 10 of 4 0.23Down
Adult carcass13 21 of 4 0.80None
Larval CNS4 01 of 4 0.26Down
Larval Salivary gland3 10 of 4 0.17Down
Larval midgut9 10 of 4 0.55Down
Larval tubule11 21 of 4 0.60None
Larval hindgut6 11 of 4 0.37Down
Larval fat body36 104 of 4 2.10None
Larval trachea4 31 of 4 0.27Down
Larval carcass9 10 of 4 0.53Down
S2 cells (growing)8 11 of 4 0.49Down
Whole fly17 14 of 4

Looking for FBgn0050184. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime