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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050195 through 18771 annotations produced 1 hits



(CG30195):

Annotation Number : CG30195
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050195
Gbrowse : chr2R:18534117-18534746 (-) // 100.0 //
Probeset : 1635651_at
Accessions : protein= NP_611696;, nucleotide= NM_137852;
FlyMine data for FBgn0050195.
VDRC has 3 RNAi stocks for FBgn0050195 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain13 ± 14 of 4 0.80None
Head20 ± 24 of 4 1.10None
Eye10 ± 14 of 4 0.61None
Thoracicoabdominal ganglion14 ± 14 of 4 0.80None
Salivary gland23 ± 51 of 4 1.35None
Crop116 ± 74 of 4 6.60Up
Midgut36 ± 24 of 4 2.10Up
Tubule10 ± 12 of 4 0.60Down
Hindgut56 ± 34 of 4 3.20Up
Heart109 ± 74 of 4 6.23Up
Fat body15 ± 42 of 4 0.87None
Ovary9 ± 03 of 4 0.50None
Testis10 ± 13 of 4 0.60None
Male accessory glands87 ± 74 of 4 4.90Up
Virgin spermatheca12 ± 13 of 4 0.72None
Mated spermatheca14 ± 14 of 4 0.83None
Adult carcass25 ± 33 of 4 1.40None
Larval CNS61 ± 124 of 4 3.50Up
Larval Salivary gland20 ± 24 of 4 1.14None
Larval midgut18 ± 33 of 4 1.05None
Larval tubule10 ± 13 of 4 0.60None
Larval hindgut89 ± 44 of 4 5.06Up
Larval fat body13 ± 11 of 4 0.70None
Larval trachea92 ± 174 of 4 5.23Up
Larval carcass70 ± 34 of 4 4.03Up
S2 cells (growing)12 ± 04 of 4 0.68None
Whole fly17 ± 44 of 4

Looking for FBgn0050195. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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