Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050263 through 18771 annotations produced 1 hits



(CG30263):

Annotation Number : CG30263
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050263
Gbrowse : chr2R:17563825-17572505 (+) // 100.0 //
Probeset : 1640739_at
Accessions : protein= NP_611603;, nucleotide= NM_137759;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0050263.
BioGrid reports that CG30263 interacts with CG31869 CG5094 CG5701 CG5804 CG8151 CG8322 .
VDRC has 2 RNAi stocks for FBgn0050263 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain12 ± 12 of 4 2.10None
Head11 ± 13 of 4 1.90Up
Eye16 ± 04 of 4 2.76Up
Thoracicoabdominal ganglion28 ± 14 of 4 4.80Up
Salivary gland14 ± 20 of 4 2.43Up
Crop5 ± 10 of 4 0.90None
Midgut4 ± 20 of 4 0.70None
Tubule4 ± 10 of 4 0.70None
Hindgut1 ± 00 of 4 0.30Down
Heart1 ± 00 of 4 0.31Down
Fat body6 ± 40 of 4 1.08None
Ovary1 ± 10 of 4 0.30Down
Testis5 ± 10 of 4 0.90None
Male accessory glands13 ± 61 of 4 2.20None
Virgin spermatheca4 ± 10 of 4 0.79None
Mated spermatheca4 ± 30 of 4 0.79None
Adult carcass11 ± 31 of 4 1.90None
Larval CNS7 ± 12 of 4 1.21None
Larval Salivary gland1 ± 00 of 4 0.31Down
Larval midgut7 ± 31 of 4 1.31None
Larval tubule1 ± 00 of 4 0.20Down
Larval hindgut2 ± 00 of 4 0.36Down
Larval fat body3 ± 10 of 4 0.60None
Larval trachea2 ± 10 of 4 0.35Down
Larval carcass3 ± 10 of 4 0.54None
S2 cells (growing)1 ± 00 of 4 0.18Down
Whole fly6 ± 10 of 4

Looking for FBgn0050263. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime