FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0050269 through 18771 annotations produced 1 hits

(CG30269):

Annotation Number : CG30269
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050269
Gbrowse : chr2R:18555446-18556318 (+) // 100.0 //
Probeset : 1627958_at
Accessions : protein= NP_611704;, nucleotide= NM_137860;
FlyMine data for FBgn0050269.
VDRC has 1 RNAi stocks for FBgn0050269 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 1	2 of 4	0.10	Down
Head	166 ± 6	4 of 4	0.90	None
Eye	210 ± 18	4 of 4	1.15	None
Thoracicoabdominal ganglion	15 ± 1	0 of 4	0.10	Down
Salivary gland	213 ± 8	4 of 4	1.17	None
Crop	360 ± 13	4 of 4	2.00	Up
Midgut	1169 ± 18	4 of 4	6.40	Up
Tubule	1723 ± 92	4 of 4	9.40	Up
Hindgut	322 ± 9	4 of 4	1.80	Up
Heart	154 ± 17	4 of 4	0.84	None
Fat body	198 ± 52	4 of 4	1.09	None
Ovary	26 ± 0	4 of 4	0.10	Down
Testis	80 ± 3	4 of 4	0.40	Down
Male accessory glands	28 ± 11	2 of 4	0.20	Down
Virgin spermatheca	247 ± 23	4 of 4	1.36	None
Mated spermatheca	376 ± 14	4 of 4	2.06	Up
Adult carcass	183 ± 6	4 of 4	1.00	None
Larval CNS	10 ± 3	3 of 4	0.06	Down
Larval Salivary gland	504 ± 42	4 of 4	2.76	Up
Larval midgut	951 ± 100	4 of 4	5.20	Up
Larval tubule	2261 ± 24	4 of 4	12.40	Up
Larval hindgut	438 ± 42	4 of 4	2.40	Up
Larval fat body	618 ± 73	4 of 4	3.40	Up
Larval trachea	118 ± 20	4 of 4	0.65	Down
Larval carcass	39 ± 2	4 of 4	0.22	Down
S2 cells (growing)	43 ± 2	4 of 4	0.24	Down
Whole fly	182 ± 19	4 of 4

Looking for FBgn0050269. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720