Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050273 through 18771 annotations produced 1 hits



(CG30273):

Annotation Number : CG30273
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050273
Gbrowse : chr2R:18554675-18555445 (+) // 100.0 //
Probeset : 1640540_at
Accessions : protein= NP_611704; /// NP_726223;, nucleotide= NM_137860; /// NM_166542;
FlyMine data for FBgn0050273.
VDRC has 1 RNAi stocks for FBgn0050273 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 00 of 4 0.20Down
Head56 ± 84 of 4 1.60None
Eye81 ± 74 of 4 2.33Up
Thoracicoabdominal ganglion3 ± 10 of 4 0.10Down
Salivary gland18 ± 41 of 4 0.53Down
Crop108 ± 74 of 4 3.10Up
Midgut37 ± 22 of 4 1.10None
Tubule203 ± 134 of 4 5.80Up
Hindgut64 ± 54 of 4 1.80Up
Heart48 ± 84 of 4 1.39None
Fat body63 ± 174 of 4 1.83Up
Ovary9 ± 01 of 4 0.30Down
Testis14 ± 12 of 4 0.40Down
Male accessory glands7 ± 20 of 4 0.20Down
Virgin spermatheca18 ± 31 of 4 0.53Down
Mated spermatheca26 ± 23 of 4 0.75None
Adult carcass50 ± 54 of 4 1.40None
Larval CNS2 ± 10 of 4 0.07Down
Larval Salivary gland43 ± 24 of 4 1.25None
Larval midgut31 ± 50 of 4 0.89None
Larval tubule484 ± 204 of 413.80Up
Larval hindgut76 ± 74 of 4 2.19Up
Larval fat body144 ± 194 of 4 4.10Up
Larval trachea40 ± 64 of 4 1.17None
Larval carcass22 ± 11 of 4 0.63None
S2 cells (growing)20 ± 14 of 4 0.60None
Whole fly35 ± 44 of 4

Looking for FBgn0050273. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime