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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050324 through 18771 annotations produced 1 hits



(CG30324):

Annotation Number : CG30324
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050324
Gbrowse : chr2R:12175092-12175738 (-) // 100.0 //
Probeset : 1629365_at
Accessions : protein= NP_725558;, nucleotide= NM_166160;
FlyMine data for FBgn0050324.
BioGrid reports that CG30324 interacts with CG32514 CG5450 .
TRiP has 1 RNAi stocks for FBgn0050324 available for purchase.
VDRC has 3 RNAi stocks for FBgn0050324 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain7 ± 12 of 4 0.00Down
Head4 ± 10 of 4 0.00Down
Eye5 ± 10 of 4 0.02Down
Thoracicoabdominal ganglion1 ± 00 of 4 0.00Down
Salivary gland6 ± 10 of 4 0.03Down
Crop6 ± 00 of 4 0.00Down
Midgut7 ± 10 of 4 0.00Down
Tubule1 ± 00 of 4 0.00Down
Hindgut1 ± 00 of 4 0.00Down
Heart2 ± 00 of 4 0.01Down
Fat body3 ± 30 of 4 0.02Down
Ovary0 ± 00 of 4 0.00Down
Testis2194 ± 1154 of 4 9.80Up
Male accessory glands5 ± 20 of 4 0.00Down
Virgin spermatheca3 ± 10 of 4 0.02Down
Mated spermatheca4 ± 00 of 4 0.02Down
Adult carcass14 ± 42 of 4 0.10Down
Larval CNS4 ± 21 of 4 0.02Down
Larval Salivary gland7 ± 21 of 4 0.03Down
Larval midgut12 ± 10 of 4 0.05Down
Larval tubule2 ± 10 of 4 0.00Down
Larval hindgut1 ± 00 of 4 0.01Down
Larval fat body100 ± 383 of 4 0.50Down
Larval trachea11 ± 103 of 4 0.05Down
Larval carcass2 ± 10 of 4 0.01Down
S2 cells (growing)1 ± 00 of 4 0.01Down
Whole fly223 ± 74 of 4

Looking for FBgn0050324. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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