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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050423 through 18771 annotations produced 1 hits



(CG30423):

Annotation Number : CG30423
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050423
Gbrowse : chr2R:20762492-20763378 (-) // 100.0 //
Probeset : 1625714_a_at
Accessions : protein= NP_726490;, nucleotide= NM_166691;
FlyMine data for FBgn0050423.
VDRC has 2 RNAi stocks for FBgn0050423 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain719 174 of 4 1.40Up
Head841 164 of 4 1.60Up
Eye1595 164 of 4 2.99Up
Thoracicoabdominal ganglion829 224 of 4 1.60Up
Salivary gland2553 854 of 4 4.79Up
Crop978 134 of 4 1.80Up
Midgut949 124 of 4 1.80Up
Tubule984 294 of 4 1.80Up
Hindgut875 114 of 4 1.60Up
Heart1677 584 of 4 3.15Up
Fat body1163 404 of 4 2.18Up
Ovary551 124 of 4 1.00None
Testis339 144 of 4 0.60Down
Male accessory glands1033 194 of 4 1.90Up
Virgin spermatheca1166 324 of 4 2.19Up
Mated spermatheca1099 254 of 4 2.06Up
Adult carcass859 104 of 4 1.60Up
Larval CNS847 324 of 4 1.59Up
Larval Salivary gland1875 284 of 4 3.52Up
Larval midgut1471 544 of 4 2.76Up
Larval tubule2007 184 of 4 3.80Up
Larval hindgut1270 504 of 4 2.38Up
Larval fat body1683 1924 of 4 3.20Up
Larval trachea1548 674 of 4 2.91Up
Larval carcass1351 654 of 4 2.54Up
S2 cells (growing)1310 264 of 4 2.46Up
Whole fly533 144 of 4

Looking for FBgn0050423. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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