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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0050464 through 18771 annotations produced 1 hits

CG30464 (Ir52d):

Annotation Number : CG30464
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050464
Gbrowse : chr2R:11394168-11395871 (+) // 100.0 //
Probeset : 1631306_at
Accessions : protein= NP_611042;, nucleotide= NM_137198;
FlyMine data for FBgn0050464.
VDRC has 1 RNAi stocks for FBgn0050464 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain1 00 of 4 0.60None
Head2 00 of 4 1.20None
Eye0 00 of 4 0.22None
Thoracicoabdominal ganglion3 00 of 4 1.50None
Salivary gland9 10 of 4 4.21Up
Crop2 10 of 4 0.90None
Midgut1 00 of 4 0.70None
Tubule4 00 of 4 1.90Up
Hindgut1 00 of 4 0.60None
Heart3 10 of 4 1.50None
Fat body8 20 of 4 3.55Up
Ovary1 10 of 4 0.80None
Testis3 10 of 4 1.30None
Male accessory glands1 00 of 4 0.80None
Virgin spermatheca3 10 of 4 1.30None
Mated spermatheca7 00 of 4 3.18Up
Adult carcass5 20 of 4 2.30None
Larval CNS1 10 of 4 0.81None
Larval Salivary gland6 10 of 4 2.88None
Larval midgut5 21 of 4 2.12None
Larval tubule4 10 of 4 1.80None
Larval hindgut0 00 of 4 0.34None
Larval fat body5 10 of 4 2.40None
Larval trachea0 00 of 4 0.20None
Larval carcass3 10 of 4 1.40None
S2 cells (growing)1 00 of 4 0.74None
Whole fly2 00 of 4

Looking for FBgn0050464. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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