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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0050466 through 18771 annotations produced 1 hits



(CG30466):

Annotation Number : CG30466
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0050466
Gbrowse : chr2R:11458972-11460268 (+) // 100.0 //
Probeset : 1623508_at
Accessions : protein= NP_725477;, nucleotide= NM_166103;
FlyMine data for FBgn0050466.
TRiP has 1 RNAi stocks for FBgn0050466 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain48 ± 24 of 4 1.10None
Head26 ± 34 of 4 0.60Down
Eye31 ± 24 of 4 0.71Down
Thoracicoabdominal ganglion36 ± 24 of 4 0.80Down
Salivary gland11 ± 20 of 4 0.26Down
Crop42 ± 44 of 4 0.90None
Midgut10 ± 14 of 4 0.20Down
Tubule7 ± 12 of 4 0.20Down
Hindgut16 ± 14 of 4 0.40Down
Heart13 ± 11 of 4 0.31Down
Fat body26 ± 52 of 4 0.59Down
Ovary36 ± 14 of 4 0.80Down
Testis421 ± 104 of 4 9.40Up
Male accessory glands8 ± 40 of 4 0.20Down
Virgin spermatheca15 ± 12 of 4 0.33Down
Mated spermatheca14 ± 02 of 4 0.31Down
Adult carcass15 ± 31 of 4 0.30Down
Larval CNS42 ± 54 of 4 0.95None
Larval Salivary gland16 ± 22 of 4 0.37Down
Larval midgut13 ± 04 of 4 0.29Down
Larval tubule14 ± 24 of 4 0.30Down
Larval hindgut21 ± 34 of 4 0.47Down
Larval fat body88 ± 224 of 4 2.00None
Larval trachea26 ± 34 of 4 0.60Down
Larval carcass13 ± 13 of 4 0.29Down
S2 cells (growing)98 ± 14 of 4 2.18Up
Whole fly45 ± 04 of 4

Looking for FBgn0050466. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime