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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051002 through 18771 annotations produced 1 hits



(CG31002):

Annotation Number : CG31002
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051002
Gbrowse : chr3R:27219303-27221020 (-) // 100.0 //
Probeset : 1636165_at
Accessions : protein= NP_651866;, nucleotide= NM_143609;
Interpro : "0015020 // glucuronosyltransferase activity // inferred from sequence or structural similarity /// 0015020 // glucurono
FlyMine data for FBgn0051002.
BDGP gene expression has embryonic in situ data for CG31002: 18 pix of staining in 2 body parts.
Homophila reports that CG31002 is a close match (2e-48) to human gene GNT1;UGT1;UGT1A1 (NP_000454), a gene associated with Crigler-Najjar syndrome, type I, 218800 (3);Crigler-Najjar syndrome, type II, 606785 (3);Hyperbilirubinemia, familial transcient neonatal, 237900 (3);[Gilbert syndrome], 143500 (3).
VDRC has 5 RNAi stocks for FBgn0051002 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain4 ± 10 of 4 0.30Down
Head3 ± 10 of 4 0.30Down
Eye3 ± 11 of 4 0.30Down
Thoracicoabdominal ganglion3 ± 10 of 4 0.30Down
Salivary gland5 ± 10 of 4 0.44Down
Crop3 ± 10 of 4 0.20Down
Midgut2 ± 10 of 4 0.20Down
Tubule9 ± 21 of 4 0.80None
Hindgut4 ± 10 of 4 0.30Down
Heart2 ± 10 of 4 0.22Down
Fat body7 ± 41 of 4 0.62None
Ovary1 ± 00 of 4 0.10Down
Testis4 ± 00 of 4 0.40Down
Male accessory glands4 ± 20 of 4 0.40None
Virgin spermatheca17 ± 42 of 4 1.39None
Mated spermatheca22 ± 62 of 4 1.83None
Adult carcass4 ± 00 of 4 0.30Down
Larval CNS4 ± 10 of 4 0.34Down
Larval Salivary gland5 ± 10 of 4 0.47Down
Larval midgut4 ± 10 of 4 0.40Down
Larval tubule12 ± 22 of 4 1.00None
Larval hindgut3 ± 10 of 4 0.25Down
Larval fat body2 ± 10 of 4 0.20Down
Larval trachea2 ± 20 of 4 0.20Down
Larval carcass2 ± 00 of 4 0.17Down
S2 cells (growing)0 ± 00 of 4 0.07Down
Whole fly12 ± 13 of 4

Looking for FBgn0051002. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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