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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051019 through 18771 annotations produced 1 hits



(CG31019):

Annotation Number : CG31019
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051019
Gbrowse : chr3R:26422725-26425018 (+) // 100.0 //
Probeset : 1629729_at
Accessions : protein= NP_733391;, nucleotide= NM_170512;
Interpro : 0004180 // carboxypeptidase activity // inferred from electronic annotation /// 0004181 // metallocarboxypeptidase activ
FlyMine data for FBgn0051019.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain9 ± 00 of 4 3.60None
Head13 ± 20 of 4 5.10Up
Eye5 ± 10 of 4 1.92None
Thoracicoabdominal ganglion7 ± 10 of 4 2.70None
Salivary gland3 ± 00 of 4 1.27None
Crop9 ± 00 of 4 3.50Up
Midgut5 ± 10 of 4 2.10None
Tubule17 ± 21 of 4 6.50Up
Hindgut8 ± 10 of 4 3.30Up
Heart4 ± 10 of 4 1.78None
Fat body8 ± 20 of 4 3.01Up
Ovary1 ± 00 of 4 0.60None
Testis6 ± 11 of 4 2.20None
Male accessory glands2 ± 00 of 4 0.80None
Virgin spermatheca9 ± 20 of 4 3.56None
Mated spermatheca10 ± 10 of 4 3.83Up
Adult carcass11 ± 50 of 4 4.30None
Larval CNS3 ± 00 of 4 1.20None
Larval Salivary gland8 ± 20 of 4 3.24None
Larval midgut6 ± 10 of 4 2.56None
Larval tubule8 ± 20 of 4 3.20None
Larval hindgut5 ± 10 of 4 2.04None
Larval fat body12 ± 30 of 4 4.80None
Larval trachea2 ± 10 of 4 0.80None
Larval carcass9 ± 20 of 4 3.72Up
S2 cells (growing)6 ± 10 of 4 2.34None
Whole fly2 ± 10 of 4

Looking for FBgn0051019. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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