FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051097 through 18771 annotations produced 1 hits

(CG31097):

Annotation Number : CG31097
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051097
Gbrowse : chr3R:21122059-21123508 (-) // 100.0 //
Probeset : 1635770_at
Accessions : protein= NP_733093;, nucleotide= NM_170214;
Interpro : 0016740 // transferase activity // inferred from electronic annotation
FlyMine data for FBgn0051097.
VDRC has 2 RNAi stocks for FBgn0051097 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 1	0 of 4	0.10	Down
Head	1 ± 0	0 of 4	0.10	Down
Eye	1 ± 0	0 of 4	0.06	Down
Thoracicoabdominal ganglion	1 ± 0	0 of 4	0.10	Down
Salivary gland	5 ± 2	0 of 4	0.30	Down
Crop	3 ± 1	0 of 4	0.20	Down
Midgut	14 ± 0	0 of 4	0.80	Down
Tubule	373 ± 4	4 of 4	19.70	Up
Hindgut	20 ± 1	0 of 4	1.10	None
Heart	1 ± 0	0 of 4	0.08	Down
Fat body	4 ± 2	0 of 4	0.24	Down
Ovary	3 ± 0	0 of 4	0.20	Down
Testis	1 ± 0	0 of 4	0.10	Down
Male accessory glands	1 ± 0	0 of 4	0.10	Down
Virgin spermatheca	2 ± 0	0 of 4	0.14	Down
Mated spermatheca	3 ± 1	0 of 4	0.18	Down
Adult carcass	6 ± 3	0 of 4	0.30	Down
Larval CNS	1 ± 0	0 of 4	0.09	Down
Larval Salivary gland	5 ± 2	0 of 4	0.31	Down
Larval midgut	11 ± 3	0 of 4	0.61	None
Larval tubule	265 ± 10	4 of 4	14.00	Up
Larval hindgut	6 ± 1	0 of 4	0.31	Down
Larval fat body	5 ± 2	0 of 4	0.30	Down
Larval trachea	0 ± 0	0 of 4	0.03	Down
Larval carcass	4 ± 1	0 of 4	0.24	Down
S2 cells (growing)	0 ± 0	0 of 4	0.05	Down
Whole fly	19 ± 1	1 of 4

Looking for FBgn0051097. 1 entries matched from 18771, in 2 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720