FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051099 through 18771 annotations produced 1 hits

(CG31099):

Annotation Number : CG31099
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051099
Gbrowse : chr3R:21135147-21136665 (-) // 100.0 //
Probeset : 1627728_at
Accessions : protein= NP_733099;, nucleotide= NM_170220;
FlyMine data for FBgn0051099.
VDRC has 2 RNAi stocks for FBgn0051099 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	9 ± 1	2 of 4	0.10	Down
Head	11 ± 1	1 of 4	0.20	Down
Eye	3 ± 1	0 of 4	0.06	Down
Thoracicoabdominal ganglion	5 ± 2	0 of 4	0.10	Down
Salivary gland	24 ± 4	0 of 4	0.38	Down
Crop	13 ± 1	1 of 4	0.20	Down
Midgut	15 ± 1	2 of 4	0.20	Down
Tubule	12 ± 1	1 of 4	0.20	Down
Hindgut	15 ± 1	3 of 4	0.20	Down
Heart	6 ± 2	2 of 4	0.11	Down
Fat body	19 ± 1	4 of 4	0.31	Down
Ovary	6 ± 1	1 of 4	0.10	Down
Testis	809 ± 23	4 of 4	12.70	Up
Male accessory glands	21 ± 2	1 of 4	0.30	Down
Virgin spermatheca	13 ± 3	2 of 4	0.21	Down
Mated spermatheca	13 ± 0	2 of 4	0.21	Down
Adult carcass	16 ± 1	0 of 4	0.30	Down
Larval CNS	11 ± 2	4 of 4	0.18	Down
Larval Salivary gland	13 ± 2	0 of 4	0.21	Down
Larval midgut	22 ± 1	2 of 4	0.35	Down
Larval tubule	16 ± 1	4 of 4	0.30	Down
Larval hindgut	14 ± 1	3 of 4	0.23	Down
Larval fat body	76 ± 38	4 of 4	1.20	None
Larval trachea	10 ± 4	1 of 4	0.17	Down
Larval carcass	23 ± 1	3 of 4	0.37	Down
S2 cells (growing)	13 ± 1	1 of 4	0.21	Down
Whole fly	63 ± 5	4 of 4

Looking for FBgn0051099. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720