FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051109 through 18771 annotations produced 1 hits

(CG31109):

Annotation Number : CG31109
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051109
Gbrowse : chr3R:20879196-20880356 (-) // 100.0 //
Probeset : 1631719_at
Accessions : protein= NP_733073;, nucleotide= NM_170194;
Pathway : 0005634 // nucleus // inferred from electronic annotation
Interpro : 0008270 // zinc ion binding // inferred from electronic annotation
FlyMine data for FBgn0051109.
BDGP gene expression has embryonic in situ data for CG31109: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0051109 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	132 ± 5	4 of 4	1.30	Up
Head	50 ± 3	4 of 4	0.50	Down
Eye	65 ± 1	4 of 4	0.63	Down
Thoracicoabdominal ganglion	102 ± 6	4 of 4	1.00	None
Salivary gland	88 ± 5	4 of 4	0.86	None
Crop	49 ± 3	4 of 4	0.50	Down
Midgut	35 ± 3	4 of 4	0.30	Down
Tubule	46 ± 1	4 of 4	0.50	Down
Hindgut	40 ± 2	4 of 4	0.40	Down
Heart	45 ± 3	4 of 4	0.44	Down
Fat body	31 ± 5	4 of 4	0.31	Down
Ovary	236 ± 4	4 of 4	2.30	Up
Testis	83 ± 1	4 of 4	0.80	None
Male accessory glands	59 ± 6	4 of 4	0.60	Down
Virgin spermatheca	30 ± 1	4 of 4	0.30	Down
Mated spermatheca	29 ± 2	4 of 4	0.29	Down
Adult carcass	37 ± 4	4 of 4	0.40	Down
Larval CNS	110 ± 4	4 of 4	1.07	None
Larval Salivary gland	58 ± 4	4 of 4	0.56	Down
Larval midgut	26 ± 3	4 of 4	0.26	Down
Larval tubule	41 ± 0	4 of 4	0.40	Down
Larval hindgut	35 ± 1	4 of 4	0.34	Down
Larval fat body	50 ± 3	4 of 4	0.50	Down
Larval trachea	89 ± 8	4 of 4	0.87	None
Larval carcass	35 ± 3	4 of 4	0.35	Down
S2 cells (growing)	49 ± 3	4 of 4	0.48	Down
Whole fly	103 ± 8	4 of 4

Looking for FBgn0051109. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720