FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051122 through 18771 annotations produced 1 hits

(CG31122):

Annotation Number : CG31122
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051122
Gbrowse : chr3R:14232352-14238589 (-) // 100.0 //
Probeset : 1637365_at
Accessions : protein= NP_001163647; /// NP_732342;, nucleotide= NM_001170176; /// NM_169815;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0051122.
BDGP gene expression has embryonic in situ data for CG31122: 14 pix of staining in 12 body parts.
BioGrid reports that CG31122 interacts with CG3517 CG8942 CG9193 CG17478 .
VDRC has 1 RNAi stocks for FBgn0051122 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	287 ± 7	4 of 4	2.80	Up
Head	107 ± 5	4 of 4	1.00	None
Eye	96 ± 4	4 of 4	0.92	None
Thoracicoabdominal ganglion	208 ± 9	4 of 4	2.00	Up
Salivary gland	82 ± 5	4 of 4	0.79	Down
Crop	172 ± 6	4 of 4	1.70	Up
Midgut	51 ± 2	4 of 4	0.50	Down
Tubule	74 ± 1	4 of 4	0.70	Down
Hindgut	88 ± 2	4 of 4	0.80	None
Heart	86 ± 1	4 of 4	0.82	None
Fat body	62 ± 4	4 of 4	0.59	Down
Ovary	318 ± 7	4 of 4	3.10	Up
Testis	14 ± 1	4 of 4	0.10	Down
Male accessory glands	66 ± 2	4 of 4	0.60	Down
Virgin spermatheca	84 ± 8	4 of 4	0.81	None
Mated spermatheca	89 ± 3	4 of 4	0.86	None
Adult carcass	78 ± 5	4 of 4	0.70	Down
Larval CNS	400 ± 30	4 of 4	3.83	Up
Larval Salivary gland	85 ± 3	4 of 4	0.82	None
Larval midgut	55 ± 3	4 of 4	0.53	Down
Larval tubule	71 ± 1	4 of 4	0.70	Down
Larval hindgut	83 ± 3	4 of 4	0.80	Down
Larval fat body	57 ± 4	4 of 4	0.60	Down
Larval trachea	131 ± 10	4 of 4	1.26	Up
Larval carcass	94 ± 5	4 of 4	0.90	None
S2 cells (growing)	248 ± 5	4 of 4	2.38	Up
Whole fly	104 ± 6	4 of 4

Looking for FBgn0051122. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720