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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051126 through 18771 annotations produced 1 hits



(CG31126):

Annotation Number : CG31126
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051126
Gbrowse : chr3R:20485487-20485891 (+) // 100.0 //
Probeset : 1636684_at
Accessions : protein= NP_733027;, nucleotide= NM_170162;
FlyMine data for FBgn0051126.
VDRC has 5 RNAi stocks for FBgn0051126 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain240 ± 34 of 4 1.40Up
Head164 ± 124 of 4 1.00None
Eye132 ± 24 of 4 0.79Down
Thoracicoabdominal ganglion289 ± 54 of 4 1.70Up
Salivary gland218 ± 114 of 4 1.31Up
Crop109 ± 104 of 4 0.70Down
Midgut145 ± 44 of 4 0.90Down
Tubule143 ± 64 of 4 0.90Down
Hindgut156 ± 34 of 4 0.90None
Heart162 ± 34 of 4 0.98None
Fat body172 ± 84 of 4 1.03None
Ovary223 ± 54 of 4 1.30Up
Testis241 ± 94 of 4 1.50Up
Male accessory glands73 ± 14 of 4 0.40Down
Virgin spermatheca114 ± 84 of 4 0.69Down
Mated spermatheca99 ± 54 of 4 0.60Down
Adult carcass188 ± 94 of 4 1.10None
Larval CNS248 ± 134 of 4 1.49Up
Larval Salivary gland137 ± 54 of 4 0.83Down
Larval midgut97 ± 34 of 4 0.59Down
Larval tubule84 ± 44 of 4 0.50Down
Larval hindgut144 ± 104 of 4 0.87None
Larval fat body94 ± 54 of 4 0.60Down
Larval trachea127 ± 234 of 4 0.77Down
Larval carcass139 ± 164 of 4 0.84None
S2 cells (growing)160 ± 74 of 4 0.96None
Whole fly166 ± 54 of 4

Looking for FBgn0051126. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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