FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051158 through 18771 annotations produced 3 hits

(CG31158):

Annotation Number : HDC15037
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051158
Gbrowse : chr3R:18414002-18414450 (+) // 100.0 //
Probeset : 1625455_at
Accessions : protein= NP_001097873; /// NP_001097874; /// NP_001163691; /// NP_732769; /// NP_788718;, nucleotide= NM_001104403; /// NM_001104404; /// NM_001170220; /// NM_170027; /// NM_176541;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005086
FlyMine data for FBgn0051158.
VDRC has 1 RNAi stocks for FBgn0051158 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	14 ± 0	4 of 4	3.00	Up
Head	7 ± 1	0 of 4	1.60	None
Eye	18 ± 2	3 of 4	3.87	Up
Thoracicoabdominal ganglion	2 ± 1	0 of 4	0.60	None
Salivary gland	11 ± 8	1 of 4	2.51	None
Crop	8 ± 0	1 of 4	1.80	Up
Midgut	15 ± 3	2 of 4	3.20	Up
Tubule	7 ± 0	0 of 4	1.70	Up
Hindgut	7 ± 2	2 of 4	1.60	None
Heart	13 ± 2	2 of 4	2.94	Up
Fat body	10 ± 1	0 of 4	2.14	Up
Ovary	3 ± 1	0 of 4	0.70	None
Testis	7 ± 1	0 of 4	1.60	None
Male accessory glands	14 ± 2	2 of 4	3.10	Up
Virgin spermatheca	9 ± 3	1 of 4	2.00	None
Mated spermatheca	6 ± 2	1 of 4	1.31	None
Adult carcass	6 ± 2	0 of 4	1.30	None
Larval CNS	8 ± 3	3 of 4	1.76	None
Larval Salivary gland	23 ± 1	0 of 4	5.07	Up
Larval midgut	12 ± 3	1 of 4	2.62	None
Larval tubule	10 ± 2	1 of 4	2.10	None
Larval hindgut	10 ± 1	1 of 4	2.25	Up
Larval fat body	3 ± 1	0 of 4	0.70	None
Larval trachea	27 ± 4	4 of 4	5.84	Up
Larval carcass	16 ± 1	2 of 4	3.57	Up
S2 cells (growing)	16 ± 1	4 of 4	3.57	Up
Whole fly	4 ± 0	0 of 4

(CG31158):

Annotation Number : CG31158
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051158
Gbrowse : chr3R:18424679-18434193 (+) // 100.0 //
Probeset : 1633026_a_at
Accessions : protein= NP_001097873; /// NP_001097874; /// NP_001163691; /// NP_732769; /// NP_788718;, nucleotide= NM_001104403; /// NM_001104404; /// NM_001170220; /// NM_170027; /// NM_176541;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005086
FlyMine data for FBgn0051158.
Homophila reports that CG31158 is a close match (2e-13) to human gene ARFGEF2;BIG2 (NP_006411), a gene associated with Periventricular heterotopia with microcephaly, 608097 (3).
BioGrid reports that CG31158 interacts with CG8793 .
VDRC has 1 RNAi stocks for FBgn0051158 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	360 ± 17	4 of 4	2.70	Up
Head	204 ± 5	4 of 4	1.60	Up
Eye	374 ± 27	4 of 4	2.85	Up
Thoracicoabdominal ganglion	407 ± 3	4 of 4	3.10	Up
Salivary gland	59 ± 5	4 of 4	0.45	Down
Crop	305 ± 10	4 of 4	2.30	Up
Midgut	62 ± 3	4 of 4	0.50	Down
Tubule	43 ± 1	4 of 4	0.30	Down
Hindgut	146 ± 3	4 of 4	1.10	None
Heart	125 ± 5	4 of 4	0.96	None
Fat body	114 ± 9	4 of 4	0.87	None
Ovary	414 ± 6	4 of 4	3.20	Up
Testis	69 ± 1	4 of 4	0.50	Down
Male accessory glands	139 ± 3	4 of 4	1.10	None
Virgin spermatheca	61 ± 4	4 of 4	0.47	Down
Mated spermatheca	65 ± 2	4 of 4	0.50	Down
Adult carcass	98 ± 6	4 of 4	0.80	Down
Larval CNS	354 ± 41	4 of 4	2.70	Up
Larval Salivary gland	205 ± 5	4 of 4	1.56	Up
Larval midgut	91 ± 5	4 of 4	0.70	Down
Larval tubule	114 ± 6	4 of 4	0.90	None
Larval hindgut	125 ± 4	4 of 4	0.95	None
Larval fat body	90 ± 3	4 of 4	0.70	Down
Larval trachea	172 ± 18	4 of 4	1.31	Up
Larval carcass	140 ± 8	4 of 4	1.07	None
S2 cells (growing)	232 ± 10	4 of 4	1.77	Up
Whole fly	131 ± 7	4 of 4

(CG31158):

Annotation Number : S.C3R002454
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051158
Gbrowse : chr3R:18414002-18422108 (+) // 100.0 //
Probeset : 1629612_at
Accessions : protein= NP_001097873; /// NP_001097874; /// NP_001163691; /// NP_732769; /// NP_788718;, nucleotide= NM_001104403; /// NM_001104404; /// NM_001170220; /// NM_170027; /// NM_176541;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005086 // ARF guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005086
FlyMine data for FBgn0051158.
VDRC has 1 RNAi stocks for FBgn0051158 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	0.80	None
Head	7 ± 2	0 of 4	1.00	None
Eye	4 ± 1	0 of 4	0.63	None
Thoracicoabdominal ganglion	11 ± 3	0 of 4	1.60	None
Salivary gland	18 ± 4	0 of 4	2.57	None
Crop	9 ± 3	0 of 4	1.30	None
Midgut	25 ± 2	0 of 4	3.60	Up
Tubule	9 ± 0	0 of 4	1.30	Up
Hindgut	6 ± 1	0 of 4	0.90	None
Heart	4 ± 1	0 of 4	0.61	None
Fat body	7 ± 3	0 of 4	1.02	None
Ovary	4 ± 0	0 of 4	0.60	None
Testis	3 ± 1	0 of 4	0.50	None
Male accessory glands	13 ± 1	0 of 4	1.90	Up
Virgin spermatheca	13 ± 2	0 of 4	1.94	None
Mated spermatheca	9 ± 2	0 of 4	1.27	None
Adult carcass	13 ± 4	0 of 4	1.90	None
Larval CNS	1 ± 0	0 of 4	0.22	Down
Larval Salivary gland	14 ± 4	0 of 4	2.06	None
Larval midgut	6 ± 1	0 of 4	0.92	None
Larval tubule	6 ± 3	0 of 4	0.90	None
Larval hindgut	8 ± 1	0 of 4	1.16	None
Larval fat body	7 ± 2	0 of 4	1.10	None
Larval trachea	7 ± 5	0 of 4	1.04	None
Larval carcass	2 ± 0	0 of 4	0.37	None
S2 cells (growing)	8 ± 1	1 of 4	1.16	None
Whole fly	7 ± 1	0 of 4

Looking for FBgn0051158. 3 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720