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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051174 through 18771 annotations produced 1 hits



(CG31174):

Annotation Number : CG31174
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051174
Gbrowse : chr3R:17694402-17695236 (-) // 100.0 //
Probeset : 1628539_at
Accessions : protein= NP_732671;, nucleotide= NM_169976;
FlyMine data for FBgn0051174.
VDRC has 2 RNAi stocks for FBgn0051174 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain14 ± 04 of 4 0.20Down
Head7 ± 04 of 4 0.10Down
Eye7 ± 03 of 4 0.09Down
Thoracicoabdominal ganglion9 ± 23 of 4 0.10Down
Salivary gland51 ± 54 of 4 0.60Down
Crop9 ± 14 of 4 0.10Down
Midgut5 ± 01 of 4 0.10Down
Tubule10 ± 13 of 4 0.10Down
Hindgut10 ± 04 of 4 0.10Down
Heart13 ± 14 of 4 0.16Down
Fat body6 ± 11 of 4 0.07Down
Ovary9 ± 14 of 4 0.10Down
Testis911 ± 454 of 410.60Up
Male accessory glands7 ± 00 of 4 0.10Down
Virgin spermatheca7 ± 13 of 4 0.09Down
Mated spermatheca6 ± 14 of 4 0.07Down
Adult carcass13 ± 33 of 4 0.20Down
Larval CNS7 ± 14 of 4 0.08Down
Larval Salivary gland6 ± 13 of 4 0.08Down
Larval midgut8 ± 23 of 4 0.10Down
Larval tubule10 ± 24 of 4 0.10Down
Larval hindgut5 ± 03 of 4 0.06Down
Larval fat body99 ± 404 of 4 1.20None
Larval trachea11 ± 113 of 4 0.13Down
Larval carcass9 ± 24 of 4 0.11Down
S2 cells (growing)5 ± 13 of 4 0.06Down
Whole fly85 ± 84 of 4

Looking for FBgn0051174. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime