FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051183 through 18771 annotations produced 1 hits

(CG31183):

Annotation Number : CG31183
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051183
Gbrowse : chr3R:11683806-11695774 (-) // 99.87 //
Probeset : 1632257_at
Accessions : protein= NP_650505;, nucleotide= NM_142248;
Pathway : 0016020 // membrane // inferred from electronic annotation
Interpro : "0000166 // nucleotide binding // inferred from electronic annotation /// 0004383 // guanylate cyclase activity // infer
FlyMine data for FBgn0051183.
Homophila reports that CG31183 is a close match (8e-12) to human gene NTRK2;TRKB (NP_006171), a gene associated with Obesity, hyperphagia, and developmental delay (3).
TRiP has 1 RNAi stocks for FBgn0051183 available for purchase.
VDRC has 4 RNAi stocks for FBgn0051183 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	38 ± 0	4 of 4	1.60	Up
Head	52 ± 1	4 of 4	2.20	Up
Eye	46 ± 4	4 of 4	1.95	Up
Thoracicoabdominal ganglion	53 ± 4	4 of 4	2.30	Up
Salivary gland	15 ± 7	0 of 4	0.64	None
Crop	41 ± 2	1 of 4	1.70	Up
Midgut	51 ± 3	2 of 4	2.20	Up
Tubule	11 ± 0	1 of 4	0.50	Down
Hindgut	26 ± 3	1 of 4	1.10	None
Heart	94 ± 1	4 of 4	3.97	Up
Fat body	147 ± 38	4 of 4	6.21	Up
Ovary	1 ± 0	0 of 4	0.10	Down
Testis	8 ± 1	0 of 4	0.40	Down
Male accessory glands	24 ± 5	0 of 4	1.00	None
Virgin spermatheca	76 ± 6	4 of 4	3.19	Up
Mated spermatheca	67 ± 0	4 of 4	2.85	Up
Adult carcass	73 ± 7	3 of 4	3.10	Up
Larval CNS	11 ± 3	0 of 4	0.46	Down
Larval Salivary gland	174 ± 14	4 of 4	7.32	Up
Larval midgut	92 ± 9	2 of 4	3.90	Up
Larval tubule	35 ± 3	1 of 4	1.50	Up
Larval hindgut	11 ± 1	0 of 4	0.48	Down
Larval fat body	4 ± 2	0 of 4	0.20	Down
Larval trachea	21 ± 6	2 of 4	0.89	None
Larval carcass	61 ± 5	2 of 4	2.56	Up
S2 cells (growing)	5 ± 0	0 of 4	0.25	Down
Whole fly	23 ± 1	1 of 4

Looking for FBgn0051183. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720