FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051195 through 18771 annotations produced 1 hits

(CG31195):

Annotation Number : CG31195
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051195
Gbrowse : chr3R:16584168-16588087 (-) // 100.0 //
Probeset : 1636037_at
Accessions : protein= NP_732553;, nucleotide= NM_169923;
FlyMine data for FBgn0051195.
VDRC has 2 RNAi stocks for FBgn0051195 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	26 ± 1	4 of 4	0.50	None
Head	38 ± 6	4 of 4	0.80	None
Eye	15 ± 1	4 of 4	0.31	Down
Thoracicoabdominal ganglion	14 ± 1	3 of 4	0.30	Down
Salivary gland	85 ± 8	4 of 4	1.69	Up
Crop	61 ± 2	4 of 4	1.20	None
Midgut	19 ± 2	3 of 4	0.40	Down
Tubule	13 ± 1	3 of 4	0.30	Down
Hindgut	74 ± 2	4 of 4	1.50	None
Heart	13 ± 0	3 of 4	0.26	Down
Fat body	20 ± 4	4 of 4	0.40	Down
Ovary	69 ± 2	4 of 4	1.40	None
Testis	24 ± 2	4 of 4	0.50	Down
Male accessory glands	77 ± 2	4 of 4	1.50	Up
Virgin spermatheca	20 ± 1	4 of 4	0.40	Down
Mated spermatheca	25 ± 3	4 of 4	0.50	Down
Adult carcass	35 ± 3	4 of 4	0.70	None
Larval CNS	27 ± 9	4 of 4	0.54	None
Larval Salivary gland	111 ± 7	4 of 4	2.21	Up
Larval midgut	17 ± 2	4 of 4	0.35	Down
Larval tubule	15 ± 2	4 of 4	0.30	Down
Larval hindgut	72 ± 5	4 of 4	1.44	None
Larval fat body	26 ± 5	4 of 4	0.50	None
Larval trachea	56 ± 2	4 of 4	1.12	None
Larval carcass	56 ± 8	4 of 4	1.12	None
S2 cells (growing)	88 ± 4	4 of 4	1.75	Up
Whole fly	50 ± 8	4 of 4

Looking for FBgn0051195. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720