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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)

Searching for FBGN0051251 through 18771 annotations produced 1 hits

NudC-like (CG31251):

Annotation Number : CG31251
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051251
Gbrowse : chr3R:13509530-13510633 (-) // 100.0 //
Probeset : 1628738_at
Accessions : protein= NP_732260;, nucleotide= NM_169772;
FlyMine data for FBgn0051251.
TRiP has 1 RNAi stocks for FBgn0051251 available for purchase.
VDRC has 2 RNAi stocks for FBgn0051251 available for purchase.

TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain57 24 of 4 1.10None
Head29 24 of 4 0.60Down
Eye22 14 of 4 0.42Down
Thoracicoabdominal ganglion52 14 of 4 1.00None
Salivary gland16 30 of 4 0.31Down
Crop37 24 of 4 0.70Down
Midgut22 12 of 4 0.40Down
Tubule17 13 of 4 0.30Down
Hindgut25 24 of 4 0.50Down
Heart18 14 of 4 0.35Down
Fat body24 34 of 4 0.46Down
Ovary105 44 of 4 2.00Up
Testis39 34 of 4 0.70Down
Male accessory glands30 24 of 4 0.60Down
Virgin spermatheca15 21 of 4 0.30Down
Mated spermatheca19 11 of 4 0.37Down
Adult carcass25 33 of 4 0.50Down
Larval CNS74 54 of 4 1.42Up
Larval Salivary gland27 14 of 4 0.51Down
Larval midgut15 02 of 4 0.29Down
Larval tubule20 14 of 4 0.40Down
Larval hindgut25 14 of 4 0.48Down
Larval fat body29 52 of 4 0.60Down
Larval trachea34 34 of 4 0.65Down
Larval carcass29 14 of 4 0.56Down
S2 cells (growing)65 24 of 4 1.24Up
Whole fly52 34 of 4

Looking for FBgn0051251. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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