FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for FBGN0051268 through 18771 annotations produced 1 hits

(CG31268):

Annotation Number : CG31268
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051268
Gbrowse : chr3R:12857538-12858969 (+) // 100.0 //
Probeset : 1624507_at
Accessions : protein= NP_732191;, nucleotide= NM_169739;
FlyMine data for FBgn0051268.
VDRC has 2 RNAi stocks for FBgn0051268 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	2.30	None
Head	2 ± 1	0 of 4	3.60	None
Eye	2 ± 1	1 of 4	4.73	None
Thoracicoabdominal ganglion	0 ± 0	0 of 4	1.50	None
Salivary gland	2 ± 0	0 of 4	3.86	Up
Crop	0 ± 0	0 of 4	1.10	None
Midgut	1 ± 0	0 of 4	2.40	None
Tubule	1 ± 0	0 of 4	3.50	Up
Hindgut	1 ± 0	0 of 4	3.10	None
Heart	1 ± 0	0 of 4	2.64	None
Fat body	4 ± 2	0 of 4	7.23	None
Ovary	0 ± 0	0 of 4	0.70	None
Testis	1 ± 0	0 of 4	1.90	None
Male accessory glands	2 ± 1	0 of 4	5.00	None
Virgin spermatheca	0 ± 0	0 of 4	0.91	None
Mated spermatheca	1 ± 0	0 of 4	2.50	None
Adult carcass	1 ± 0	0 of 4	3.10	None
Larval CNS	1 ± 0	0 of 4	2.05	None
Larval Salivary gland	2 ± 0	0 of 4	4.09	None
Larval midgut	0 ± 0	0 of 4	0.95	None
Larval tubule	1 ± 1	0 of 4	3.20	None
Larval hindgut	1 ± 0	0 of 4	2.95	None
Larval fat body	3 ± 1	0 of 4	6.00	None
Larval trachea	1 ± 1	0 of 4	2.73	None
Larval carcass	0 ± 0	0 of 4	0.86	None
S2 cells (growing)	0 ± 0	0 of 4	0.86	None
Whole fly	0 ± 0	0 of 4

Looking for FBgn0051268. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720