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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051337 through 18771 annotations produced 1 hits



(CG31337):

Annotation Number : CG31337
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051337
Gbrowse : chr3R:9369693-9371106 (-) // 100.0 //
Probeset : 1626917_at
Accessions : protein= NP_731817;, nucleotide= NM_169526;
FlyMine data for FBgn0051337.
BDGP gene expression has embryonic in situ data for CG31337: 18 pix of staining in 4 body parts.
VDRC has 2 RNAi stocks for FBgn0051337 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 00 of 4 0.80None
Head5 ± 01 of 4 1.10None
Eye2 ± 10 of 4 0.45None
Thoracicoabdominal ganglion3 ± 10 of 4 0.70None
Salivary gland9 ± 31 of 4 2.18None
Crop5 ± 11 of 4 1.20None
Midgut3 ± 10 of 4 0.70None
Tubule4 ± 00 of 4 1.10None
Hindgut4 ± 11 of 4 1.00None
Heart2 ± 00 of 4 0.57None
Fat body7 ± 41 of 4 1.74None
Ovary2 ± 01 of 4 0.60None
Testis3 ± 00 of 4 0.70None
Male accessory glands3 ± 20 of 4 0.90None
Virgin spermatheca6 ± 12 of 4 1.51None
Mated spermatheca7 ± 13 of 4 1.65None
Adult carcass9 ± 22 of 4 2.10None
Larval CNS4 ± 21 of 4 1.02None
Larval Salivary gland4 ± 01 of 4 0.89None
Larval midgut7 ± 12 of 4 1.64None
Larval tubule37 ± 64 of 4 8.20Up
Larval hindgut13 ± 24 of 4 2.96Up
Larval fat body173 ± 164 of 438.10Up
Larval trachea41 ± 44 of 4 9.04Up
Larval carcass134 ± 64 of 429.55Up
S2 cells (growing)10 ± 14 of 4 2.30Up
Whole fly4 ± 11 of 4

Looking for FBgn0051337. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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