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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051345 through 18771 annotations produced 1 hits



(CG31345):

Annotation Number : CG31345
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051345
Gbrowse : chr3R:8637066-8642751 (-) // 100.0 //
Probeset : 1639363_at
Accessions : protein= NP_731744;, nucleotide= NM_169480;
Pathway : engulfment // inferred from mutant phenotype"
FlyMine data for FBgn0051345.
VDRC has 2 RNAi stocks for FBgn0051345 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain290 ± 124 of 414.30Up
Head153 ± 84 of 4 7.50Up
Eye367 ± 174 of 418.07Up
Thoracicoabdominal ganglion1087 ± 134 of 453.50Up
Salivary gland7 ± 20 of 4 0.35Down
Crop2 ± 00 of 4 0.10Down
Midgut10 ± 11 of 4 0.50Down
Tubule5 ± 10 of 4 0.30Down
Hindgut4 ± 10 of 4 0.20Down
Heart5 ± 10 of 4 0.25Down
Fat body4 ± 20 of 4 0.19Down
Ovary2 ± 10 of 4 0.10Down
Testis3 ± 12 of 4 0.20Down
Male accessory glands6 ± 20 of 4 0.30Down
Virgin spermatheca7 ± 11 of 4 0.38Down
Mated spermatheca4 ± 01 of 4 0.20Down
Adult carcass22 ± 43 of 4 1.10None
Larval CNS2 ± 10 of 4 0.14Down
Larval Salivary gland4 ± 00 of 4 0.23Down
Larval midgut6 ± 10 of 4 0.31Down
Larval tubule5 ± 10 of 4 0.30Down
Larval hindgut5 ± 10 of 4 0.27Down
Larval fat body0 ± 00 of 4 0.00Down
Larval trachea11 ± 73 of 4 0.57None
Larval carcass27 ± 14 of 4 1.34Up
S2 cells (growing)1 ± 00 of 4 0.07Down
Whole fly20 ± 14 of 4

Looking for FBgn0051345. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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