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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051357 through 18771 annotations produced 1 hits



(CG31357):

Annotation Number : CG31357
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051357
Gbrowse : chr3R:20654000-20655645 (-) // 100.0 //
Probeset : 1632916_at
Accessions : protein= NP_733044;, nucleotide= NM_170171;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0051357.
BDGP gene expression has embryonic in situ data for CG31357: 21 pix of staining in 11 body parts.
BioGrid reports that CG31357 interacts with CG6617 CG3622 CG4795 CG6156 .
VDRC has 2 RNAi stocks for FBgn0051357 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain121 ± 14 of 4 1.00None
Head102 ± 74 of 4 0.90None
Eye112 ± 54 of 4 0.95None
Thoracicoabdominal ganglion138 ± 54 of 4 1.20None
Salivary gland93 ± 24 of 4 0.79Down
Crop145 ± 44 of 4 1.20Up
Midgut111 ± 34 of 4 0.90None
Tubule151 ± 104 of 4 1.30Up
Hindgut158 ± 54 of 4 1.30Up
Heart106 ± 44 of 4 0.89None
Fat body86 ± 64 of 4 0.73Down
Ovary165 ± 34 of 4 1.40Up
Testis30 ± 24 of 4 0.30Down
Male accessory glands109 ± 134 of 4 0.90None
Virgin spermatheca163 ± 74 of 4 1.37Up
Mated spermatheca125 ± 84 of 4 1.06None
Adult carcass124 ± 94 of 4 1.00None
Larval CNS161 ± 104 of 4 1.36Up
Larval Salivary gland35 ± 14 of 4 0.30Down
Larval midgut134 ± 184 of 4 1.14None
Larval tubule430 ± 154 of 4 3.60Up
Larval hindgut136 ± 174 of 4 1.15None
Larval fat body186 ± 224 of 4 1.60Up
Larval trachea128 ± 314 of 4 1.08None
Larval carcass112 ± 214 of 4 0.95None
S2 cells (growing)145 ± 14 of 4 1.22Up
Whole fly118 ± 74 of 4

Looking for FBgn0051357. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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