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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for FBGN0051360 through 18771 annotations produced 1 hits



(CG31360):

Annotation Number : CG31360
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0051360
Gbrowse : chr3R:13510823-13511531 (+) // 100.0 //
Probeset : 1624831_at
Accessions : protein= NP_732261;, nucleotide= NM_169773;
FlyMine data for FBgn0051360.
VDRC has 3 RNAi stocks for FBgn0051360 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain246 ± 124 of 4 1.80Up
Head157 ± 94 of 4 1.20None
Eye110 ± 44 of 4 0.81Down
Thoracicoabdominal ganglion205 ± 54 of 4 1.50Up
Salivary gland141 ± 34 of 4 1.04None
Crop145 ± 94 of 4 1.10None
Midgut93 ± 24 of 4 0.70Down
Tubule53 ± 34 of 4 0.40Down
Hindgut92 ± 44 of 4 0.70Down
Heart105 ± 44 of 4 0.77Down
Fat body124 ± 74 of 4 0.91None
Ovary203 ± 54 of 4 1.50Up
Testis383 ± 104 of 4 2.80Up
Male accessory glands463 ± 284 of 4 3.40Up
Virgin spermatheca95 ± 84 of 4 0.70Down
Mated spermatheca113 ± 84 of 4 0.82None
Adult carcass110 ± 134 of 4 0.80None
Larval CNS174 ± 114 of 4 1.27Up
Larval Salivary gland154 ± 74 of 4 1.13None
Larval midgut127 ± 44 of 4 0.93None
Larval tubule107 ± 34 of 4 0.80Down
Larval hindgut124 ± 44 of 4 0.91None
Larval fat body159 ± 254 of 4 1.20None
Larval trachea133 ± 124 of 4 0.97None
Larval carcass124 ± 64 of 4 0.91None
S2 cells (growing)244 ± 44 of 4 1.78Up
Whole fly137 ± 54 of 4

Looking for FBgn0051360. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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